Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.96■□□□□ 0.63
H2afb1S4R1E0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb1S4R1E0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb1S4R1E0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb1S4R1E0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb1S4R1E0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb1S4R1E0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb1S4R1E0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb1S4R1E0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb1S4R1E0 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.95■□□□□ 0.62
H2afb1S4R1E0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb1S4R1E0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.94■□□□□ 0.62
H2afb1S4R1E0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb1S4R1E0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb1S4R1E0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.94■□□□□ 0.62
H2afb1S4R1E0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb1S4R1E0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.94■□□□□ 0.62
H2afb1S4R1E0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb1S4R1E0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb1S4R1E0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.94■□□□□ 0.62
H2afb1S4R1E0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb1S4R1E0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
H2afb1S4R1E0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb1S4R1E0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb1S4R1E0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb1S4R1E0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb1S4R1E0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb1S4R1E0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb1S4R1E0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.93■□□□□ 0.62
H2afb1S4R1E0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb1S4R1E0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb1S4R1E0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.92■□□□□ 0.62
H2afb1S4R1E0 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.92■□□□□ 0.62
H2afb1S4R1E0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb1S4R1E0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.92■□□□□ 0.62
H2afb1S4R1E0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb1S4R1E0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb1S4R1E0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.92■□□□□ 0.62
H2afb1S4R1E0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
H2afb1S4R1E0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb1S4R1E0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
H2afb1S4R1E0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb1S4R1E0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
H2afb1S4R1E0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
H2afb1S4R1E0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
H2afb1S4R1E0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb1S4R1E0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
H2afb1S4R1E0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb1S4R1E0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb1S4R1E0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
H2afb1S4R1E0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb1S4R1E0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.9■□□□□ 0.62
H2afb1S4R1E0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb1S4R1E0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
H2afb1S4R1E0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb1S4R1E0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
H2afb1S4R1E0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb1S4R1E0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb1S4R1E0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb1S4R1E0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb1S4R1E0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb1S4R1E0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb1S4R1E0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb1S4R1E0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb1S4R1E0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb1S4R1E0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb1S4R1E0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb1S4R1E0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb1S4R1E0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb1S4R1E0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb1S4R1E0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb1S4R1E0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.87■□□□□ 0.61
H2afb1S4R1E0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb1S4R1E0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb1S4R1E0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb1S4R1E0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb1S4R1E0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb1S4R1E0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb1S4R1E0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb1S4R1E0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1S4R1E0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1S4R1E0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1S4R1E0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1S4R1E0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1S4R1E0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
H2afb1S4R1E0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.86■□□□□ 0.61
H2afb1S4R1E0 Gm14523-201ENSMUST00000117260 558 ntBASIC18.86■□□□□ 0.61
H2afb1S4R1E0 Gm27502-201ENSMUST00000183495 199 ntBASIC18.86■□□□□ 0.61
H2afb1S4R1E0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
H2afb1S4R1E0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1S4R1E0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb1S4R1E0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.85■□□□□ 0.61
H2afb1S4R1E0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.85■□□□□ 0.61
H2afb1S4R1E0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.85■□□□□ 0.61
H2afb1S4R1E0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb1S4R1E0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb1S4R1E0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb1S4R1E0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
H2afb1S4R1E0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb1S4R1E0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms