Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Nkx2-4Q9EQM3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Nkx2-4Q9EQM3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.92■■□□□ 1.1
Nkx2-4Q9EQM3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nkx2-4Q9EQM3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Nkx2-4Q9EQM3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Nkx2-4Q9EQM3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Nkx2-4Q9EQM3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
Nkx2-4Q9EQM3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Nkx2-4Q9EQM3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.91■■□□□ 1.1
Nkx2-4Q9EQM3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.91■■□□□ 1.1
Nkx2-4Q9EQM3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Nkx2-4Q9EQM3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Nkx2-4Q9EQM3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nkx2-4Q9EQM3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nkx2-4Q9EQM3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Nkx2-4Q9EQM3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nkx2-4Q9EQM3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.9■■□□□ 1.1
Nkx2-4Q9EQM3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Nkx2-4Q9EQM3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nkx2-4Q9EQM3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nkx2-4Q9EQM3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Nkx2-4Q9EQM3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nkx2-4Q9EQM3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nkx2-4Q9EQM3 Gm42569-201ENSMUST00000200539 472 ntBASIC21.89■■□□□ 1.09
Nkx2-4Q9EQM3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Nkx2-4Q9EQM3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Nkx2-4Q9EQM3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nkx2-4Q9EQM3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nkx2-4Q9EQM3 Gm26571-201ENSMUST00000181399 666 ntBASIC21.88■■□□□ 1.09
Nkx2-4Q9EQM3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Nkx2-4Q9EQM3 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.88■■□□□ 1.09
Nkx2-4Q9EQM3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nkx2-4Q9EQM3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx2-4Q9EQM3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx2-4Q9EQM3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Nkx2-4Q9EQM3 Gm43173-201ENSMUST00000202246 593 ntBASIC21.87■■□□□ 1.09
Nkx2-4Q9EQM3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.87■■□□□ 1.09
Nkx2-4Q9EQM3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Nkx2-4Q9EQM3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.87■■□□□ 1.09
Nkx2-4Q9EQM3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx2-4Q9EQM3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.87■■□□□ 1.09
Nkx2-4Q9EQM3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Nkx2-4Q9EQM3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.86■■□□□ 1.09
Nkx2-4Q9EQM3 Gm27405-201ENSMUST00000184201 112 ntBASIC21.86■■□□□ 1.09
Nkx2-4Q9EQM3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-4Q9EQM3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Nkx2-4Q9EQM3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-4Q9EQM3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-4Q9EQM3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-4Q9EQM3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.85■■□□□ 1.09
Nkx2-4Q9EQM3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-4Q9EQM3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.85■■□□□ 1.09
Nkx2-4Q9EQM3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-4Q9EQM3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-4Q9EQM3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-4Q9EQM3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.85■■□□□ 1.09
Nkx2-4Q9EQM3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-4Q9EQM3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-4Q9EQM3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.84■■□□□ 1.09
Nkx2-4Q9EQM3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-4Q9EQM3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-4Q9EQM3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Nkx2-4Q9EQM3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-4Q9EQM3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Nkx2-4Q9EQM3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-4Q9EQM3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-4Q9EQM3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx2-4Q9EQM3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
Nkx2-4Q9EQM3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx2-4Q9EQM3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nkx2-4Q9EQM3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nkx2-4Q9EQM3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Nkx2-4Q9EQM3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-4Q9EQM3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Nkx2-4Q9EQM3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-4Q9EQM3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-4Q9EQM3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-4Q9EQM3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-4Q9EQM3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-4Q9EQM3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-4Q9EQM3 Gm27011-201ENSMUST00000182352 972 ntBASIC21.81■■□□□ 1.08
Nkx2-4Q9EQM3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Nkx2-4Q9EQM3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Nkx2-4Q9EQM3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Nkx2-4Q9EQM3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.81■■□□□ 1.08
Nkx2-4Q9EQM3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Nkx2-4Q9EQM3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-4Q9EQM3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 139.6 ms