Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61bQ9CQS8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61bQ9CQS8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC11.27□□□□□ -0.61
Sec61bQ9CQS8 AC140930.3-201ENSMUST00000222935 274 ntBASIC11.27□□□□□ -0.61
Sec61bQ9CQS8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61bQ9CQS8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sec61bQ9CQS8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61bQ9CQS8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61bQ9CQS8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC11.26□□□□□ -0.61
Sec61bQ9CQS8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61bQ9CQS8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC11.26□□□□□ -0.61
Sec61bQ9CQS8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sec61bQ9CQS8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61bQ9CQS8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61bQ9CQS8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61bQ9CQS8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61bQ9CQS8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61bQ9CQS8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61bQ9CQS8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC11.25□□□□□ -0.61
Sec61bQ9CQS8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC11.25□□□□□ -0.61
Sec61bQ9CQS8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61bQ9CQS8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sec61bQ9CQS8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC11.25□□□□□ -0.61
Sec61bQ9CQS8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC11.25□□□□□ -0.61
Sec61bQ9CQS8 AC116713.1-201ENSMUST00000215074 430 ntBASIC11.25□□□□□ -0.61
Sec61bQ9CQS8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC11.25□□□□□ -0.61
Sec61bQ9CQS8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC11.25□□□□□ -0.61
Sec61bQ9CQS8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61bQ9CQS8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Gm10620-201ENSMUST00000098379 1332 ntBASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61bQ9CQS8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61bQ9CQS8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61bQ9CQS8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Sec61bQ9CQS8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC11.22□□□□□ -0.61
Sec61bQ9CQS8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61bQ9CQS8 Golgb1-201ENSMUST00000023534 498 ntBASIC11.22□□□□□ -0.61
Sec61bQ9CQS8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sec61bQ9CQS8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sec61bQ9CQS8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sec61bQ9CQS8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sec61bQ9CQS8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sec61bQ9CQS8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 Gm6934-201ENSMUST00000194780 1905 ntBASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61bQ9CQS8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms