Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cdh23Q99PF4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Cdh23Q99PF4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdh23Q99PF4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdh23Q99PF4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdh23Q99PF4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdh23Q99PF4 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.03■■□□□ 1.12
Cdh23Q99PF4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdh23Q99PF4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.03■■□□□ 1.12
Cdh23Q99PF4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cdh23Q99PF4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdh23Q99PF4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdh23Q99PF4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdh23Q99PF4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdh23Q99PF4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.02■■□□□ 1.12
Cdh23Q99PF4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cdh23Q99PF4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.02■■□□□ 1.12
Cdh23Q99PF4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cdh23Q99PF4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cdh23Q99PF4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cdh23Q99PF4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC22.02■■□□□ 1.12
Cdh23Q99PF4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cdh23Q99PF4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cdh23Q99PF4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Cdh23Q99PF4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdh23Q99PF4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cdh23Q99PF4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22■■□□□ 1.11
Cdh23Q99PF4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cdh23Q99PF4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cdh23Q99PF4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.99■■□□□ 1.11
Cdh23Q99PF4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdh23Q99PF4 Gm12251-201ENSMUST00000117893 792 ntBASIC21.99■■□□□ 1.11
Cdh23Q99PF4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cdh23Q99PF4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.99■■□□□ 1.11
Cdh23Q99PF4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdh23Q99PF4 Gm42569-201ENSMUST00000200539 472 ntBASIC21.99■■□□□ 1.11
Cdh23Q99PF4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdh23Q99PF4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Cdh23Q99PF4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdh23Q99PF4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.99■■□□□ 1.11
Cdh23Q99PF4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdh23Q99PF4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Cdh23Q99PF4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdh23Q99PF4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Cdh23Q99PF4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdh23Q99PF4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Cdh23Q99PF4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdh23Q99PF4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdh23Q99PF4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdh23Q99PF4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Cdh23Q99PF4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdh23Q99PF4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.96■■□□□ 1.11
Cdh23Q99PF4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Cdh23Q99PF4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdh23Q99PF4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.96■■□□□ 1.11
Cdh23Q99PF4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.96■■□□□ 1.11
Cdh23Q99PF4 Gm8493-201ENSMUST00000196881 489 ntBASIC21.96■■□□□ 1.11
Cdh23Q99PF4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.96■■□□□ 1.11
Cdh23Q99PF4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdh23Q99PF4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdh23Q99PF4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.95■■□□□ 1.1
Cdh23Q99PF4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Cdh23Q99PF4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
Cdh23Q99PF4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdh23Q99PF4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdh23Q99PF4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cdh23Q99PF4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Cdh23Q99PF4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.95■■□□□ 1.1
Cdh23Q99PF4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
Cdh23Q99PF4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Cdh23Q99PF4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdh23Q99PF4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdh23Q99PF4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdh23Q99PF4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdh23Q99PF4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdh23Q99PF4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.94■■□□□ 1.1
Cdh23Q99PF4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdh23Q99PF4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Cdh23Q99PF4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdh23Q99PF4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Cdh23Q99PF4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Cdh23Q99PF4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Cdh23Q99PF4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdh23Q99PF4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdh23Q99PF4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Cdh23Q99PF4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.93■■□□□ 1.1
Cdh23Q99PF4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cdh23Q99PF4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cdh23Q99PF4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdh23Q99PF4 Gm10493-201ENSMUST00000097270 612 ntBASIC21.92■■□□□ 1.1
Cdh23Q99PF4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdh23Q99PF4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.92■■□□□ 1.1
Cdh23Q99PF4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.91■■□□□ 1.1
Cdh23Q99PF4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.91■■□□□ 1.1
Cdh23Q99PF4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cdh23Q99PF4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdh23Q99PF4 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.91■■□□□ 1.1
Cdh23Q99PF4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Cdh23Q99PF4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
Cdh23Q99PF4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms