Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scrt1Q99M85 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scrt1Q99M85 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scrt1Q99M85 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.41■□□□□ 0.54
Scrt1Q99M85 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scrt1Q99M85 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scrt1Q99M85 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scrt1Q99M85 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Scrt1Q99M85 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scrt1Q99M85 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scrt1Q99M85 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scrt1Q99M85 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scrt1Q99M85 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Scrt1Q99M85 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Scrt1Q99M85 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scrt1Q99M85 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Scrt1Q99M85 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scrt1Q99M85 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scrt1Q99M85 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.39■□□□□ 0.53
Scrt1Q99M85 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scrt1Q99M85 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scrt1Q99M85 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.39■□□□□ 0.53
Scrt1Q99M85 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Scrt1Q99M85 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.38■□□□□ 0.53
Scrt1Q99M85 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.38■□□□□ 0.53
Scrt1Q99M85 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.38■□□□□ 0.53
Scrt1Q99M85 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.38■□□□□ 0.53
Scrt1Q99M85 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scrt1Q99M85 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Scrt1Q99M85 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scrt1Q99M85 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Scrt1Q99M85 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scrt1Q99M85 Gm10399-202ENSMUST00000202768 748 ntBASIC18.37■□□□□ 0.53
Scrt1Q99M85 Golgb1-201ENSMUST00000023534 498 ntBASIC18.37■□□□□ 0.53
Scrt1Q99M85 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Scrt1Q99M85 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scrt1Q99M85 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scrt1Q99M85 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scrt1Q99M85 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scrt1Q99M85 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scrt1Q99M85 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scrt1Q99M85 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scrt1Q99M85 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scrt1Q99M85 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Scrt1Q99M85 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.36■□□□□ 0.53
Scrt1Q99M85 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scrt1Q99M85 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scrt1Q99M85 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scrt1Q99M85 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Scrt1Q99M85 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scrt1Q99M85 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scrt1Q99M85 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scrt1Q99M85 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.35■□□□□ 0.53
Scrt1Q99M85 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scrt1Q99M85 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scrt1Q99M85 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scrt1Q99M85 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Scrt1Q99M85 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scrt1Q99M85 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scrt1Q99M85 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scrt1Q99M85 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scrt1Q99M85 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scrt1Q99M85 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Scrt1Q99M85 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scrt1Q99M85 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scrt1Q99M85 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scrt1Q99M85 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scrt1Q99M85 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Scrt1Q99M85 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scrt1Q99M85 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scrt1Q99M85 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.33■□□□□ 0.52
Scrt1Q99M85 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Scrt1Q99M85 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scrt1Q99M85 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scrt1Q99M85 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Scrt1Q99M85 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scrt1Q99M85 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scrt1Q99M85 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.32■□□□□ 0.52
Scrt1Q99M85 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scrt1Q99M85 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.32■□□□□ 0.52
Scrt1Q99M85 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scrt1Q99M85 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scrt1Q99M85 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scrt1Q99M85 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scrt1Q99M85 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scrt1Q99M85 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scrt1Q99M85 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Scrt1Q99M85 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scrt1Q99M85 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.31■□□□□ 0.52
Scrt1Q99M85 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.31■□□□□ 0.52
Scrt1Q99M85 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.31■□□□□ 0.52
Scrt1Q99M85 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scrt1Q99M85 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scrt1Q99M85 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.3■□□□□ 0.52
Scrt1Q99M85 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.3■□□□□ 0.52
Scrt1Q99M85 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scrt1Q99M85 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scrt1Q99M85 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
Scrt1Q99M85 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.3■□□□□ 0.52
Scrt1Q99M85 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms