Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdca3Q99M54 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdca3Q99M54 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdca3Q99M54 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdca3Q99M54 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdca3Q99M54 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdca3Q99M54 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cdca3Q99M54 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdca3Q99M54 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdca3Q99M54 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdca3Q99M54 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdca3Q99M54 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
Cdca3Q99M54 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdca3Q99M54 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdca3Q99M54 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdca3Q99M54 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.4■□□□□ 0.7
Cdca3Q99M54 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cdca3Q99M54 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Cdca3Q99M54 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cdca3Q99M54 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdca3Q99M54 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdca3Q99M54 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdca3Q99M54 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdca3Q99M54 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdca3Q99M54 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cdca3Q99M54 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdca3Q99M54 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdca3Q99M54 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.39■□□□□ 0.69
Cdca3Q99M54 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdca3Q99M54 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdca3Q99M54 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cdca3Q99M54 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.38■□□□□ 0.69
Cdca3Q99M54 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdca3Q99M54 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdca3Q99M54 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdca3Q99M54 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdca3Q99M54 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdca3Q99M54 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cdca3Q99M54 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdca3Q99M54 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.37■□□□□ 0.69
Cdca3Q99M54 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Cdca3Q99M54 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdca3Q99M54 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdca3Q99M54 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdca3Q99M54 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdca3Q99M54 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.37■□□□□ 0.69
Cdca3Q99M54 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdca3Q99M54 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cdca3Q99M54 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdca3Q99M54 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.36■□□□□ 0.69
Cdca3Q99M54 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdca3Q99M54 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdca3Q99M54 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdca3Q99M54 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdca3Q99M54 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdca3Q99M54 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdca3Q99M54 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdca3Q99M54 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdca3Q99M54 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdca3Q99M54 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cdca3Q99M54 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdca3Q99M54 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdca3Q99M54 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.35■□□□□ 0.69
Cdca3Q99M54 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdca3Q99M54 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdca3Q99M54 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdca3Q99M54 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdca3Q99M54 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdca3Q99M54 Gm7417-201ENSMUST00000192950 473 ntBASIC19.34■□□□□ 0.69
Cdca3Q99M54 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cdca3Q99M54 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
Cdca3Q99M54 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cdca3Q99M54 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdca3Q99M54 Serp2-204ENSMUST00000228055 705 ntBASIC19.33■□□□□ 0.68
Cdca3Q99M54 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cdca3Q99M54 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdca3Q99M54 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Cdca3Q99M54 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdca3Q99M54 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.32■□□□□ 0.68
Cdca3Q99M54 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdca3Q99M54 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.32■□□□□ 0.68
Cdca3Q99M54 Gm13241-201ENSMUST00000094493 780 ntBASIC19.32■□□□□ 0.68
Cdca3Q99M54 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.32■□□□□ 0.68
Cdca3Q99M54 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdca3Q99M54 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cdca3Q99M54 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdca3Q99M54 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdca3Q99M54 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.31■□□□□ 0.68
Cdca3Q99M54 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdca3Q99M54 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdca3Q99M54 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cdca3Q99M54 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdca3Q99M54 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdca3Q99M54 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.31■□□□□ 0.68
Cdca3Q99M54 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdca3Q99M54 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cdca3Q99M54 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cdca3Q99M54 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdca3Q99M54 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdca3Q99M54 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms