Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhgb1Q91XX8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhgb1Q91XX8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhgb1Q91XX8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhgb1Q91XX8 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.88■■□□□ 1.09
Pcdhgb1Q91XX8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhgb1Q91XX8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhgb1Q91XX8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhgb1Q91XX8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Pcdhgb1Q91XX8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhgb1Q91XX8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhgb1Q91XX8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.87■■□□□ 1.09
Pcdhgb1Q91XX8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhgb1Q91XX8 Gm22238-201ENSMUST00000175222 88 ntBASIC21.87■■□□□ 1.09
Pcdhgb1Q91XX8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhgb1Q91XX8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.87■■□□□ 1.09
Pcdhgb1Q91XX8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.87■■□□□ 1.09
Pcdhgb1Q91XX8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhgb1Q91XX8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pcdhgb1Q91XX8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhgb1Q91XX8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.86■■□□□ 1.09
Pcdhgb1Q91XX8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhgb1Q91XX8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhgb1Q91XX8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhgb1Q91XX8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhgb1Q91XX8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdhgb1Q91XX8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhgb1Q91XX8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.84■■□□□ 1.09
Pcdhgb1Q91XX8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhgb1Q91XX8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.84■■□□□ 1.09
Pcdhgb1Q91XX8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Pcdhgb1Q91XX8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhgb1Q91XX8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhgb1Q91XX8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhgb1Q91XX8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhgb1Q91XX8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhgb1Q91XX8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhgb1Q91XX8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pcdhgb1Q91XX8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Pcdhgb1Q91XX8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhgb1Q91XX8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.82■■□□□ 1.08
Pcdhgb1Q91XX8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhgb1Q91XX8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhgb1Q91XX8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhgb1Q91XX8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhgb1Q91XX8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhgb1Q91XX8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhgb1Q91XX8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.81■■□□□ 1.08
Pcdhgb1Q91XX8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhgb1Q91XX8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhgb1Q91XX8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhgb1Q91XX8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhgb1Q91XX8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhgb1Q91XX8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhgb1Q91XX8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhgb1Q91XX8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhgb1Q91XX8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.8■■□□□ 1.08
Pcdhgb1Q91XX8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Pcdhgb1Q91XX8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhgb1Q91XX8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdhgb1Q91XX8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgb1Q91XX8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgb1Q91XX8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgb1Q91XX8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Pcdhgb1Q91XX8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgb1Q91XX8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgb1Q91XX8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgb1Q91XX8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgb1Q91XX8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhgb1Q91XX8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhgb1Q91XX8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Pcdhgb1Q91XX8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhgb1Q91XX8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhgb1Q91XX8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhgb1Q91XX8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgb1Q91XX8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgb1Q91XX8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgb1Q91XX8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgb1Q91XX8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgb1Q91XX8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhgb1Q91XX8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.76■■□□□ 1.07
Pcdhgb1Q91XX8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgb1Q91XX8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgb1Q91XX8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgb1Q91XX8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgb1Q91XX8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Pcdhgb1Q91XX8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
Pcdhgb1Q91XX8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgb1Q91XX8 Gm15039-201ENSMUST00000118914 875 ntBASIC21.75■■□□□ 1.07
Pcdhgb1Q91XX8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgb1Q91XX8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgb1Q91XX8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhgb1Q91XX8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgb1Q91XX8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgb1Q91XX8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdhgb1Q91XX8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhgb1Q91XX8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgb1Q91XX8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgb1Q91XX8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhgb1Q91XX8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms