Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usb1Q91W78 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.73■□□□□ 0.91
Usb1Q91W78 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.73■□□□□ 0.91
Usb1Q91W78 Gm15820-201ENSMUST00000201566 728 ntBASIC20.73■□□□□ 0.91
Usb1Q91W78 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usb1Q91W78 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Usb1Q91W78 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Usb1Q91W78 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usb1Q91W78 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usb1Q91W78 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Usb1Q91W78 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Usb1Q91W78 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usb1Q91W78 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usb1Q91W78 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usb1Q91W78 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usb1Q91W78 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usb1Q91W78 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usb1Q91W78 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usb1Q91W78 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usb1Q91W78 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Usb1Q91W78 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.71■□□□□ 0.91
Usb1Q91W78 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Usb1Q91W78 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Usb1Q91W78 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usb1Q91W78 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usb1Q91W78 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usb1Q91W78 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usb1Q91W78 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.7■□□□□ 0.9
Usb1Q91W78 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usb1Q91W78 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Usb1Q91W78 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.7■□□□□ 0.9
Usb1Q91W78 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usb1Q91W78 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Usb1Q91W78 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Usb1Q91W78 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Usb1Q91W78 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usb1Q91W78 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usb1Q91W78 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usb1Q91W78 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usb1Q91W78 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.69■□□□□ 0.9
Usb1Q91W78 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usb1Q91W78 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.69■□□□□ 0.9
Usb1Q91W78 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usb1Q91W78 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usb1Q91W78 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usb1Q91W78 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.68■□□□□ 0.9
Usb1Q91W78 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.68■□□□□ 0.9
Usb1Q91W78 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usb1Q91W78 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usb1Q91W78 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usb1Q91W78 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usb1Q91W78 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usb1Q91W78 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usb1Q91W78 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usb1Q91W78 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usb1Q91W78 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usb1Q91W78 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.66■□□□□ 0.9
Usb1Q91W78 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usb1Q91W78 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usb1Q91W78 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usb1Q91W78 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usb1Q91W78 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usb1Q91W78 Gm10232-201ENSMUST00000089221 720 ntBASIC20.65■□□□□ 0.9
Usb1Q91W78 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usb1Q91W78 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Usb1Q91W78 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usb1Q91W78 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Usb1Q91W78 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usb1Q91W78 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usb1Q91W78 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usb1Q91W78 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usb1Q91W78 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usb1Q91W78 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usb1Q91W78 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usb1Q91W78 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usb1Q91W78 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Usb1Q91W78 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usb1Q91W78 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usb1Q91W78 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.63■□□□□ 0.89
Usb1Q91W78 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.63■□□□□ 0.89
Usb1Q91W78 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usb1Q91W78 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.62■□□□□ 0.89
Usb1Q91W78 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Usb1Q91W78 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Usb1Q91W78 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Usb1Q91W78 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usb1Q91W78 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usb1Q91W78 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usb1Q91W78 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usb1Q91W78 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usb1Q91W78 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usb1Q91W78 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Usb1Q91W78 Rps24-207ENSMUST00000224568 714 ntBASIC20.61■□□□□ 0.89
Usb1Q91W78 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usb1Q91W78 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Usb1Q91W78 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usb1Q91W78 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usb1Q91W78 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usb1Q91W78 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usb1Q91W78 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms