Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ddx41Q91VN6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.06■■□□□ 1.44
Ddx41Q91VN6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.06■■□□□ 1.44
Ddx41Q91VN6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.06■■□□□ 1.44
Ddx41Q91VN6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ddx41Q91VN6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ddx41Q91VN6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ddx41Q91VN6 Gm15039-201ENSMUST00000118914 875 ntBASIC24.05■■□□□ 1.44
Ddx41Q91VN6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx41Q91VN6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.05■■□□□ 1.44
Ddx41Q91VN6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.05■■□□□ 1.44
Ddx41Q91VN6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx41Q91VN6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.05■■□□□ 1.44
Ddx41Q91VN6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ddx41Q91VN6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.04■■□□□ 1.44
Ddx41Q91VN6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx41Q91VN6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Ddx41Q91VN6 Gm7417-201ENSMUST00000192950 473 ntBASIC24.04■■□□□ 1.44
Ddx41Q91VN6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx41Q91VN6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ddx41Q91VN6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.03■■□□□ 1.44
Ddx41Q91VN6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.03■■□□□ 1.44
Ddx41Q91VN6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx41Q91VN6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx41Q91VN6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx41Q91VN6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Ddx41Q91VN6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx41Q91VN6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx41Q91VN6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ddx41Q91VN6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.03■■□□□ 1.44
Ddx41Q91VN6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Ddx41Q91VN6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx41Q91VN6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx41Q91VN6 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.02■■□□□ 1.44
Ddx41Q91VN6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
Ddx41Q91VN6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
Ddx41Q91VN6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx41Q91VN6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ddx41Q91VN6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.43
Ddx41Q91VN6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx41Q91VN6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx41Q91VN6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC24.01■■□□□ 1.43
Ddx41Q91VN6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx41Q91VN6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Ddx41Q91VN6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC24.01■■□□□ 1.43
Ddx41Q91VN6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx41Q91VN6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Ddx41Q91VN6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
Ddx41Q91VN6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx41Q91VN6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx41Q91VN6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ddx41Q91VN6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC24■■□□□ 1.43
Ddx41Q91VN6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24■■□□□ 1.43
Ddx41Q91VN6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24■■□□□ 1.43
Ddx41Q91VN6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx41Q91VN6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24■■□□□ 1.43
Ddx41Q91VN6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ddx41Q91VN6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx41Q91VN6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.99■■□□□ 1.43
Ddx41Q91VN6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx41Q91VN6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx41Q91VN6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Ddx41Q91VN6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx41Q91VN6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ddx41Q91VN6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.98■■□□□ 1.43
Ddx41Q91VN6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.98■■□□□ 1.43
Ddx41Q91VN6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx41Q91VN6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx41Q91VN6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx41Q91VN6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx41Q91VN6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx41Q91VN6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ddx41Q91VN6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Ddx41Q91VN6 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.98■■□□□ 1.43
Ddx41Q91VN6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.97■■□□□ 1.43
Ddx41Q91VN6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ddx41Q91VN6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Ddx41Q91VN6 Gm40881-201ENSMUST00000223397 166 ntBASIC23.96■■□□□ 1.43
Ddx41Q91VN6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx41Q91VN6 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.96■■□□□ 1.43
Ddx41Q91VN6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ddx41Q91VN6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Ddx41Q91VN6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Ddx41Q91VN6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx41Q91VN6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.95■■□□□ 1.42
Ddx41Q91VN6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx41Q91VN6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx41Q91VN6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ddx41Q91VN6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx41Q91VN6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx41Q91VN6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Ddx41Q91VN6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ddx41Q91VN6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx41Q91VN6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx41Q91VN6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx41Q91VN6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.93■■□□□ 1.42
Ddx41Q91VN6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx41Q91VN6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx41Q91VN6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx41Q91VN6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms