Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H1fooQ8VIK3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H1fooQ8VIK3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H1fooQ8VIK3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
H1fooQ8VIK3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H1fooQ8VIK3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H1fooQ8VIK3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.59■□□□□ 0.41
H1fooQ8VIK3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
H1fooQ8VIK3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
H1fooQ8VIK3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
H1fooQ8VIK3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H1fooQ8VIK3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H1fooQ8VIK3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
H1fooQ8VIK3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H1fooQ8VIK3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H1fooQ8VIK3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H1fooQ8VIK3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
H1fooQ8VIK3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
H1fooQ8VIK3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
H1fooQ8VIK3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.57■□□□□ 0.4
H1fooQ8VIK3 Cap2-205ENSMUST00000225824 1634 ntBASIC17.57■□□□□ 0.4
H1fooQ8VIK3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H1fooQ8VIK3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H1fooQ8VIK3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H1fooQ8VIK3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H1fooQ8VIK3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
H1fooQ8VIK3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
H1fooQ8VIK3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H1fooQ8VIK3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.56■□□□□ 0.4
H1fooQ8VIK3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H1fooQ8VIK3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
H1fooQ8VIK3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H1fooQ8VIK3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H1fooQ8VIK3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H1fooQ8VIK3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
H1fooQ8VIK3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H1fooQ8VIK3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H1fooQ8VIK3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
H1fooQ8VIK3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
H1fooQ8VIK3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H1fooQ8VIK3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H1fooQ8VIK3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H1fooQ8VIK3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H1fooQ8VIK3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H1fooQ8VIK3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H1fooQ8VIK3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
H1fooQ8VIK3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
H1fooQ8VIK3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.54■□□□□ 0.4
H1fooQ8VIK3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H1fooQ8VIK3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H1fooQ8VIK3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
H1fooQ8VIK3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
H1fooQ8VIK3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H1fooQ8VIK3 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.53■□□□□ 0.4
H1fooQ8VIK3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H1fooQ8VIK3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
H1fooQ8VIK3 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.53■□□□□ 0.4
H1fooQ8VIK3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H1fooQ8VIK3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H1fooQ8VIK3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H1fooQ8VIK3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.52■□□□□ 0.4
H1fooQ8VIK3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H1fooQ8VIK3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.52■□□□□ 0.4
H1fooQ8VIK3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H1fooQ8VIK3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
H1fooQ8VIK3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H1fooQ8VIK3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H1fooQ8VIK3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
H1fooQ8VIK3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H1fooQ8VIK3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
H1fooQ8VIK3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
H1fooQ8VIK3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H1fooQ8VIK3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H1fooQ8VIK3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H1fooQ8VIK3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H1fooQ8VIK3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
H1fooQ8VIK3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H1fooQ8VIK3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H1fooQ8VIK3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
H1fooQ8VIK3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H1fooQ8VIK3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.5■□□□□ 0.39
H1fooQ8VIK3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
H1fooQ8VIK3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H1fooQ8VIK3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H1fooQ8VIK3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H1fooQ8VIK3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H1fooQ8VIK3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.49■□□□□ 0.39
H1fooQ8VIK3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H1fooQ8VIK3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.49■□□□□ 0.39
H1fooQ8VIK3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
H1fooQ8VIK3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
H1fooQ8VIK3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
H1fooQ8VIK3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H1fooQ8VIK3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H1fooQ8VIK3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
H1fooQ8VIK3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
H1fooQ8VIK3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
H1fooQ8VIK3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
H1fooQ8VIK3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H1fooQ8VIK3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms