Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.11■□□□□ 0.97
Rpa1Q8VEE4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpa1Q8VEE4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpa1Q8VEE4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpa1Q8VEE4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.1■□□□□ 0.97
Rpa1Q8VEE4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpa1Q8VEE4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpa1Q8VEE4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpa1Q8VEE4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rpa1Q8VEE4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpa1Q8VEE4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpa1Q8VEE4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.09■□□□□ 0.97
Rpa1Q8VEE4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rpa1Q8VEE4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rpa1Q8VEE4 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.09■□□□□ 0.97
Rpa1Q8VEE4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpa1Q8VEE4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rpa1Q8VEE4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpa1Q8VEE4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpa1Q8VEE4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.08■□□□□ 0.97
Rpa1Q8VEE4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rpa1Q8VEE4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rpa1Q8VEE4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpa1Q8VEE4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rpa1Q8VEE4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Rpa1Q8VEE4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpa1Q8VEE4 Gm11599-201ENSMUST00000118720 878 ntBASIC21.07■□□□□ 0.96
Rpa1Q8VEE4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rpa1Q8VEE4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.07■□□□□ 0.96
Rpa1Q8VEE4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rpa1Q8VEE4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpa1Q8VEE4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpa1Q8VEE4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpa1Q8VEE4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpa1Q8VEE4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.05■□□□□ 0.96
Rpa1Q8VEE4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpa1Q8VEE4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rpa1Q8VEE4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rpa1Q8VEE4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpa1Q8VEE4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpa1Q8VEE4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.04■□□□□ 0.96
Rpa1Q8VEE4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Rpa1Q8VEE4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpa1Q8VEE4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpa1Q8VEE4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpa1Q8VEE4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpa1Q8VEE4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rpa1Q8VEE4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rpa1Q8VEE4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rpa1Q8VEE4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpa1Q8VEE4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rpa1Q8VEE4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
Rpa1Q8VEE4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpa1Q8VEE4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpa1Q8VEE4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpa1Q8VEE4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpa1Q8VEE4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpa1Q8VEE4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpa1Q8VEE4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rpa1Q8VEE4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpa1Q8VEE4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpa1Q8VEE4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rpa1Q8VEE4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rpa1Q8VEE4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rpa1Q8VEE4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rpa1Q8VEE4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpa1Q8VEE4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpa1Q8VEE4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpa1Q8VEE4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpa1Q8VEE4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.99■□□□□ 0.95
Rpa1Q8VEE4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Rpa1Q8VEE4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.99■□□□□ 0.95
Rpa1Q8VEE4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.99■□□□□ 0.95
Rpa1Q8VEE4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpa1Q8VEE4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpa1Q8VEE4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpa1Q8VEE4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpa1Q8VEE4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rpa1Q8VEE4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpa1Q8VEE4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Rpa1Q8VEE4 Golph3-202ENSMUST00000226517 2359 ntBASIC20.97■□□□□ 0.95
Rpa1Q8VEE4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rpa1Q8VEE4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rpa1Q8VEE4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpa1Q8VEE4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpa1Q8VEE4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.97■□□□□ 0.95
Rpa1Q8VEE4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpa1Q8VEE4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms