Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
Q8VDP2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q8VDP2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8VDP2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8VDP2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8VDP2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Q8VDP2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.34■□□□□ 0.85
Q8VDP2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8VDP2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8VDP2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8VDP2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Q8VDP2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
Q8VDP2 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.34■□□□□ 0.85
Q8VDP2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Q8VDP2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q8VDP2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q8VDP2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q8VDP2 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.33■□□□□ 0.85
Q8VDP2 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.33■□□□□ 0.85
Q8VDP2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Q8VDP2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q8VDP2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.33■□□□□ 0.84
Q8VDP2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q8VDP2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q8VDP2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q8VDP2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q8VDP2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q8VDP2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.32■□□□□ 0.84
Q8VDP2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Q8VDP2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q8VDP2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.32■□□□□ 0.84
Q8VDP2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q8VDP2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q8VDP2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q8VDP2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.32■□□□□ 0.84
Q8VDP2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Q8VDP2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Q8VDP2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q8VDP2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q8VDP2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q8VDP2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Q8VDP2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Q8VDP2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q8VDP2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q8VDP2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Q8VDP2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Q8VDP2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Q8VDP2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Q8VDP2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Q8VDP2 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.3■□□□□ 0.84
Q8VDP2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.3■□□□□ 0.84
Q8VDP2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q8VDP2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q8VDP2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Q8VDP2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Q8VDP2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Q8VDP2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.29■□□□□ 0.84
Q8VDP2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8VDP2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8VDP2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q8VDP2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Q8VDP2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Q8VDP2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q8VDP2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q8VDP2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.28■□□□□ 0.84
Q8VDP2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q8VDP2 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.28■□□□□ 0.84
Q8VDP2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q8VDP2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q8VDP2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Q8VDP2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q8VDP2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Q8VDP2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q8VDP2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Q8VDP2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Q8VDP2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q8VDP2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Q8VDP2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q8VDP2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q8VDP2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q8VDP2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q8VDP2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q8VDP2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q8VDP2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.25■□□□□ 0.83
Q8VDP2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q8VDP2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Q8VDP2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Q8VDP2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Q8VDP2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q8VDP2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q8VDP2 Particl-201ENSMUST00000205370 1560 ntBASIC20.25■□□□□ 0.83
Q8VDP2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q8VDP2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q8VDP2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q8VDP2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Q8VDP2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q8VDP2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Q8VDP2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.24■□□□□ 0.83
Q8VDP2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Q8VDP2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms