Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vmn1r28Q8R2C9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vmn1r28Q8R2C9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vmn1r28Q8R2C9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vmn1r28Q8R2C9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.32■□□□□ 0.68
Vmn1r28Q8R2C9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.31■□□□□ 0.68
Vmn1r28Q8R2C9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r28Q8R2C9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r28Q8R2C9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.31■□□□□ 0.68
Vmn1r28Q8R2C9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.31■□□□□ 0.68
Vmn1r28Q8R2C9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r28Q8R2C9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r28Q8R2C9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Vmn1r28Q8R2C9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r28Q8R2C9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r28Q8R2C9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Vmn1r28Q8R2C9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.3■□□□□ 0.68
Vmn1r28Q8R2C9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r28Q8R2C9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.3■□□□□ 0.68
Vmn1r28Q8R2C9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r28Q8R2C9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r28Q8R2C9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r28Q8R2C9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r28Q8R2C9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r28Q8R2C9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.29■□□□□ 0.68
Vmn1r28Q8R2C9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r28Q8R2C9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r28Q8R2C9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r28Q8R2C9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r28Q8R2C9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r28Q8R2C9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r28Q8R2C9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r28Q8R2C9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Vmn1r28Q8R2C9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r28Q8R2C9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Vmn1r28Q8R2C9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r28Q8R2C9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r28Q8R2C9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.28■□□□□ 0.68
Vmn1r28Q8R2C9 Gm9959-201ENSMUST00000068277 390 ntBASIC19.28■□□□□ 0.68
Vmn1r28Q8R2C9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r28Q8R2C9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r28Q8R2C9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.28■□□□□ 0.68
Vmn1r28Q8R2C9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Vmn1r28Q8R2C9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vmn1r28Q8R2C9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.27■□□□□ 0.68
Vmn1r28Q8R2C9 Rps24-207ENSMUST00000224568 714 ntBASIC19.27■□□□□ 0.68
Vmn1r28Q8R2C9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r28Q8R2C9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r28Q8R2C9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Vmn1r28Q8R2C9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Vmn1r28Q8R2C9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r28Q8R2C9 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.26■□□□□ 0.67
Vmn1r28Q8R2C9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r28Q8R2C9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vmn1r28Q8R2C9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vmn1r28Q8R2C9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.25■□□□□ 0.67
Vmn1r28Q8R2C9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.25■□□□□ 0.67
Vmn1r28Q8R2C9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vmn1r28Q8R2C9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vmn1r28Q8R2C9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vmn1r28Q8R2C9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Gm14117-201ENSMUST00000122417 843 ntBASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Etf1-202ENSMUST00000180351 108 ntBASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.24■□□□□ 0.67
Vmn1r28Q8R2C9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vmn1r28Q8R2C9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.23■□□□□ 0.67
Vmn1r28Q8R2C9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.23■□□□□ 0.67
Vmn1r28Q8R2C9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Vmn1r28Q8R2C9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vmn1r28Q8R2C9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.22■□□□□ 0.67
Vmn1r28Q8R2C9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Vmn1r28Q8R2C9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vmn1r28Q8R2C9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vmn1r28Q8R2C9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vmn1r28Q8R2C9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Vmn1r28Q8R2C9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vmn1r28Q8R2C9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vmn1r28Q8R2C9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.21■□□□□ 0.67
Vmn1r28Q8R2C9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms