Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H2afjQ8R1M2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
H2afjQ8R1M2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
H2afjQ8R1M2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
H2afjQ8R1M2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.44■□□□□ 0.7
H2afjQ8R1M2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
H2afjQ8R1M2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
H2afjQ8R1M2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.43■□□□□ 0.7
H2afjQ8R1M2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
H2afjQ8R1M2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
H2afjQ8R1M2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afjQ8R1M2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afjQ8R1M2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afjQ8R1M2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.43■□□□□ 0.7
H2afjQ8R1M2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.43■□□□□ 0.7
H2afjQ8R1M2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afjQ8R1M2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afjQ8R1M2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
H2afjQ8R1M2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afjQ8R1M2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
H2afjQ8R1M2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
H2afjQ8R1M2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
H2afjQ8R1M2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
H2afjQ8R1M2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2afjQ8R1M2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.41■□□□□ 0.7
H2afjQ8R1M2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.41■□□□□ 0.7
H2afjQ8R1M2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
H2afjQ8R1M2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
H2afjQ8R1M2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2afjQ8R1M2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2afjQ8R1M2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
H2afjQ8R1M2 Gm11175-201ENSMUST00000116172 543 ntBASIC19.4■□□□□ 0.7
H2afjQ8R1M2 Gm27502-201ENSMUST00000183495 199 ntBASIC19.4■□□□□ 0.7
H2afjQ8R1M2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
H2afjQ8R1M2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afjQ8R1M2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.4■□□□□ 0.7
H2afjQ8R1M2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
H2afjQ8R1M2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.4■□□□□ 0.7
H2afjQ8R1M2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
H2afjQ8R1M2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
H2afjQ8R1M2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afjQ8R1M2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afjQ8R1M2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.39■□□□□ 0.69
H2afjQ8R1M2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
H2afjQ8R1M2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afjQ8R1M2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
H2afjQ8R1M2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afjQ8R1M2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afjQ8R1M2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afjQ8R1M2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
H2afjQ8R1M2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.38■□□□□ 0.69
H2afjQ8R1M2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afjQ8R1M2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
H2afjQ8R1M2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afjQ8R1M2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afjQ8R1M2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afjQ8R1M2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H2afjQ8R1M2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H2afjQ8R1M2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H2afjQ8R1M2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H2afjQ8R1M2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afjQ8R1M2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afjQ8R1M2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H2afjQ8R1M2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afjQ8R1M2 Gm14523-201ENSMUST00000117260 558 ntBASIC19.36■□□□□ 0.69
H2afjQ8R1M2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afjQ8R1M2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afjQ8R1M2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afjQ8R1M2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afjQ8R1M2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afjQ8R1M2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
H2afjQ8R1M2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
H2afjQ8R1M2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afjQ8R1M2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.35■□□□□ 0.69
H2afjQ8R1M2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.35■□□□□ 0.69
H2afjQ8R1M2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afjQ8R1M2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afjQ8R1M2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afjQ8R1M2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
H2afjQ8R1M2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afjQ8R1M2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.34■□□□□ 0.69
H2afjQ8R1M2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
H2afjQ8R1M2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
H2afjQ8R1M2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
H2afjQ8R1M2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
H2afjQ8R1M2 Gm7332-201ENSMUST00000118351 454 ntBASIC19.33■□□□□ 0.68
H2afjQ8R1M2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms