Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC28.14■■■□□ 2.1
Ddx54Q8K4L0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ddx54Q8K4L0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
Ddx54Q8K4L0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC28.14■■■□□ 2.1
Ddx54Q8K4L0 Gm43173-201ENSMUST00000202246 593 ntBASIC28.14■■■□□ 2.1
Ddx54Q8K4L0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ddx54Q8K4L0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ddx54Q8K4L0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC28.13■■■□□ 2.09
Ddx54Q8K4L0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC28.13■■■□□ 2.09
Ddx54Q8K4L0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ddx54Q8K4L0 Gm5576-201ENSMUST00000075809 1236 ntBASIC28.13■■■□□ 2.09
Ddx54Q8K4L0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Ddx54Q8K4L0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ddx54Q8K4L0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ddx54Q8K4L0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ddx54Q8K4L0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Ddx54Q8K4L0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ddx54Q8K4L0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ddx54Q8K4L0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ddx54Q8K4L0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ddx54Q8K4L0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Ddx54Q8K4L0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Ddx54Q8K4L0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Ddx54Q8K4L0 Gm37179-201ENSMUST00000194862 823 ntBASIC28.11■■■□□ 2.09
Ddx54Q8K4L0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC28.11■■■□□ 2.09
Ddx54Q8K4L0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Ddx54Q8K4L0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ddx54Q8K4L0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ddx54Q8K4L0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC28.1■■■□□ 2.09
Ddx54Q8K4L0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Ddx54Q8K4L0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ddx54Q8K4L0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Ddx54Q8K4L0 Gm10493-201ENSMUST00000097270 612 ntBASIC28.1■■■□□ 2.09
Ddx54Q8K4L0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ddx54Q8K4L0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC28.09■■■□□ 2.09
Ddx54Q8K4L0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ddx54Q8K4L0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
Ddx54Q8K4L0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC28.09■■■□□ 2.09
Ddx54Q8K4L0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ddx54Q8K4L0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Ddx54Q8K4L0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ddx54Q8K4L0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Ddx54Q8K4L0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.08■■■□□ 2.09
Ddx54Q8K4L0 Gm42642-201ENSMUST00000200683 355 ntBASIC28.08■■■□□ 2.09
Ddx54Q8K4L0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC28.08■■■□□ 2.09
Ddx54Q8K4L0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Ddx54Q8K4L0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.08
Ddx54Q8K4L0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Ddx54Q8K4L0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC28.07■■■□□ 2.08
Ddx54Q8K4L0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ddx54Q8K4L0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Ddx54Q8K4L0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC28.06■■■□□ 2.08
Ddx54Q8K4L0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Ddx54Q8K4L0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC28.03■■■□□ 2.08
Ddx54Q8K4L0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Ddx54Q8K4L0 Gm12251-201ENSMUST00000117893 792 ntBASIC28.03■■■□□ 2.08
Ddx54Q8K4L0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC28.03■■■□□ 2.08
Ddx54Q8K4L0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ddx54Q8K4L0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ddx54Q8K4L0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ddx54Q8K4L0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC28.01■■■□□ 2.07
Ddx54Q8K4L0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ddx54Q8K4L0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ddx54Q8K4L0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
Ddx54Q8K4L0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC28■■■□□ 2.07
Ddx54Q8K4L0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ddx54Q8K4L0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
Ddx54Q8K4L0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ddx54Q8K4L0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC27.99■■■□□ 2.07
Ddx54Q8K4L0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
Ddx54Q8K4L0 Gm10849-201ENSMUST00000100397 618 ntBASIC27.98■■■□□ 2.07
Ddx54Q8K4L0 Gm26833-201ENSMUST00000180899 440 ntBASIC27.98■■■□□ 2.07
Ddx54Q8K4L0 AC099934.2-201ENSMUST00000196389 70 ntBASIC27.98■■■□□ 2.07
Ddx54Q8K4L0 AC156953.1-201ENSMUST00000196953 70 ntBASIC27.98■■■□□ 2.07
Ddx54Q8K4L0 AC157822.2-201ENSMUST00000200291 70 ntBASIC27.98■■■□□ 2.07
Ddx54Q8K4L0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC27.98■■■□□ 2.07
Ddx54Q8K4L0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Ddx54Q8K4L0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Ddx54Q8K4L0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Ddx54Q8K4L0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
Ddx54Q8K4L0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Ddx54Q8K4L0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ddx54Q8K4L0 Gm8770-201ENSMUST00000121113 1109 ntBASIC27.97■■■□□ 2.07
Ddx54Q8K4L0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ddx54Q8K4L0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Ddx54Q8K4L0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ddx54Q8K4L0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ddx54Q8K4L0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ddx54Q8K4L0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ddx54Q8K4L0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC27.96■■■□□ 2.07
Ddx54Q8K4L0 Gm43060-201ENSMUST00000200621 289 ntBASIC27.96■■■□□ 2.07
Ddx54Q8K4L0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Ddx54Q8K4L0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC27.95■■■□□ 2.07
Ddx54Q8K4L0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Ddx54Q8K4L0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.95■■■□□ 2.06
Ddx54Q8K4L0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Ddx54Q8K4L0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ddx54Q8K4L0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
Ddx54Q8K4L0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC27.94■■■□□ 2.06
Ddx54Q8K4L0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms