Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf4Q8K4J2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ebf4Q8K4J2 Gm9812-201ENSMUST00000061934 968 ntBASIC19.18■□□□□ 0.66
Ebf4Q8K4J2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf4Q8K4J2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ebf4Q8K4J2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf4Q8K4J2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf4Q8K4J2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf4Q8K4J2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.17■□□□□ 0.66
Ebf4Q8K4J2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ebf4Q8K4J2 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.17■□□□□ 0.66
Ebf4Q8K4J2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf4Q8K4J2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf4Q8K4J2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf4Q8K4J2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf4Q8K4J2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf4Q8K4J2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf4Q8K4J2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf4Q8K4J2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.16■□□□□ 0.66
Ebf4Q8K4J2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.16■□□□□ 0.66
Ebf4Q8K4J2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf4Q8K4J2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ebf4Q8K4J2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf4Q8K4J2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf4Q8K4J2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ebf4Q8K4J2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.15■□□□□ 0.66
Ebf4Q8K4J2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf4Q8K4J2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.15■□□□□ 0.66
Ebf4Q8K4J2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf4Q8K4J2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ebf4Q8K4J2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf4Q8K4J2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.14■□□□□ 0.65
Ebf4Q8K4J2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.14■□□□□ 0.65
Ebf4Q8K4J2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf4Q8K4J2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf4Q8K4J2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf4Q8K4J2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ebf4Q8K4J2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ebf4Q8K4J2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf4Q8K4J2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf4Q8K4J2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf4Q8K4J2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf4Q8K4J2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ebf4Q8K4J2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf4Q8K4J2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf4Q8K4J2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf4Q8K4J2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf4Q8K4J2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ebf4Q8K4J2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf4Q8K4J2 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.11■□□□□ 0.65
Ebf4Q8K4J2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf4Q8K4J2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf4Q8K4J2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf4Q8K4J2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf4Q8K4J2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf4Q8K4J2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ebf4Q8K4J2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ebf4Q8K4J2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ebf4Q8K4J2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ebf4Q8K4J2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ebf4Q8K4J2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ebf4Q8K4J2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ebf4Q8K4J2 Terc-201ENSMUST00000082862 423 ntBASIC19.1■□□□□ 0.65
Ebf4Q8K4J2 Gm4799-201ENSMUST00000095396 657 ntBASIC19.1■□□□□ 0.65
Ebf4Q8K4J2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ebf4Q8K4J2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ebf4Q8K4J2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf4Q8K4J2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ebf4Q8K4J2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ebf4Q8K4J2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ebf4Q8K4J2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.08■□□□□ 0.65
Ebf4Q8K4J2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ebf4Q8K4J2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ebf4Q8K4J2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ebf4Q8K4J2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ebf4Q8K4J2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ebf4Q8K4J2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ebf4Q8K4J2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf4Q8K4J2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf4Q8K4J2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf4Q8K4J2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf4Q8K4J2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.07■□□□□ 0.64
Ebf4Q8K4J2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf4Q8K4J2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf4Q8K4J2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf4Q8K4J2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf4Q8K4J2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf4Q8K4J2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms