Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trnt1Q8K1J6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trnt1Q8K1J6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trnt1Q8K1J6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trnt1Q8K1J6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trnt1Q8K1J6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Trnt1Q8K1J6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trnt1Q8K1J6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trnt1Q8K1J6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.39■□□□□ 0.85
Trnt1Q8K1J6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Trnt1Q8K1J6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trnt1Q8K1J6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trnt1Q8K1J6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.39■□□□□ 0.85
Trnt1Q8K1J6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trnt1Q8K1J6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.39■□□□□ 0.85
Trnt1Q8K1J6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trnt1Q8K1J6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trnt1Q8K1J6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trnt1Q8K1J6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trnt1Q8K1J6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trnt1Q8K1J6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnt1Q8K1J6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnt1Q8K1J6 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.37■□□□□ 0.85
Trnt1Q8K1J6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnt1Q8K1J6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnt1Q8K1J6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trnt1Q8K1J6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnt1Q8K1J6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnt1Q8K1J6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trnt1Q8K1J6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.37■□□□□ 0.85
Trnt1Q8K1J6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trnt1Q8K1J6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.36■□□□□ 0.85
Trnt1Q8K1J6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trnt1Q8K1J6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trnt1Q8K1J6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trnt1Q8K1J6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.36■□□□□ 0.85
Trnt1Q8K1J6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.36■□□□□ 0.85
Trnt1Q8K1J6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trnt1Q8K1J6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trnt1Q8K1J6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trnt1Q8K1J6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trnt1Q8K1J6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.35■□□□□ 0.85
Trnt1Q8K1J6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trnt1Q8K1J6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trnt1Q8K1J6 Gm43566-201ENSMUST00000196851 808 ntBASIC20.35■□□□□ 0.85
Trnt1Q8K1J6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trnt1Q8K1J6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Trnt1Q8K1J6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trnt1Q8K1J6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trnt1Q8K1J6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trnt1Q8K1J6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trnt1Q8K1J6 Gm13238-201ENSMUST00000117655 780 ntBASIC20.34■□□□□ 0.85
Trnt1Q8K1J6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Trnt1Q8K1J6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trnt1Q8K1J6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trnt1Q8K1J6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trnt1Q8K1J6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Trnt1Q8K1J6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trnt1Q8K1J6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trnt1Q8K1J6 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.33■□□□□ 0.85
Trnt1Q8K1J6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trnt1Q8K1J6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trnt1Q8K1J6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trnt1Q8K1J6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trnt1Q8K1J6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.32■□□□□ 0.84
Trnt1Q8K1J6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trnt1Q8K1J6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trnt1Q8K1J6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trnt1Q8K1J6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnt1Q8K1J6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trnt1Q8K1J6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnt1Q8K1J6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnt1Q8K1J6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnt1Q8K1J6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trnt1Q8K1J6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trnt1Q8K1J6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trnt1Q8K1J6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.3■□□□□ 0.84
Trnt1Q8K1J6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trnt1Q8K1J6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trnt1Q8K1J6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trnt1Q8K1J6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trnt1Q8K1J6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trnt1Q8K1J6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms