Protein–RNA interactions for Protein: Q8K0S9

Snapc1, snRNA-activating protein complex subunit 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snapc1Q8K0S9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.18■□□□□ 0.82
Snapc1Q8K0S9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snapc1Q8K0S9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Snapc1Q8K0S9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snapc1Q8K0S9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snapc1Q8K0S9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Snapc1Q8K0S9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snapc1Q8K0S9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snapc1Q8K0S9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.17■□□□□ 0.82
Snapc1Q8K0S9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Snapc1Q8K0S9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Snapc1Q8K0S9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snapc1Q8K0S9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snapc1Q8K0S9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snapc1Q8K0S9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snapc1Q8K0S9 Iqck-206ENSMUST00000208658 2891 ntBASIC20.16■□□□□ 0.82
Snapc1Q8K0S9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snapc1Q8K0S9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Snapc1Q8K0S9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Snapc1Q8K0S9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Snapc1Q8K0S9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.16■□□□□ 0.82
Snapc1Q8K0S9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Snapc1Q8K0S9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Snapc1Q8K0S9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Snapc1Q8K0S9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Snapc1Q8K0S9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Snapc1Q8K0S9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Snapc1Q8K0S9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Snapc1Q8K0S9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.15■□□□□ 0.82
Snapc1Q8K0S9 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.15■□□□□ 0.82
Snapc1Q8K0S9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Snapc1Q8K0S9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Snapc1Q8K0S9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Snapc1Q8K0S9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snapc1Q8K0S9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snapc1Q8K0S9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snapc1Q8K0S9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snapc1Q8K0S9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snapc1Q8K0S9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snapc1Q8K0S9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Snapc1Q8K0S9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Snapc1Q8K0S9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Snapc1Q8K0S9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Snapc1Q8K0S9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snapc1Q8K0S9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snapc1Q8K0S9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snapc1Q8K0S9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Snapc1Q8K0S9 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.12■□□□□ 0.81
Snapc1Q8K0S9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Snapc1Q8K0S9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Snapc1Q8K0S9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Snapc1Q8K0S9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Snapc1Q8K0S9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Snapc1Q8K0S9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Snapc1Q8K0S9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Snapc1Q8K0S9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Snapc1Q8K0S9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snapc1Q8K0S9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snapc1Q8K0S9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snapc1Q8K0S9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snapc1Q8K0S9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snapc1Q8K0S9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snapc1Q8K0S9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Snapc1Q8K0S9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snapc1Q8K0S9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snapc1Q8K0S9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snapc1Q8K0S9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snapc1Q8K0S9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snapc1Q8K0S9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Snapc1Q8K0S9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Snapc1Q8K0S9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.09■□□□□ 0.81
Snapc1Q8K0S9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Snapc1Q8K0S9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.09■□□□□ 0.81
Snapc1Q8K0S9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.09■□□□□ 0.81
Snapc1Q8K0S9 Gm7432-201ENSMUST00000210343 879 ntBASIC20.09■□□□□ 0.81
Snapc1Q8K0S9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Snapc1Q8K0S9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Snapc1Q8K0S9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.09■□□□□ 0.81
Snapc1Q8K0S9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Snapc1Q8K0S9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Snapc1Q8K0S9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Snapc1Q8K0S9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.08■□□□□ 0.81
Snapc1Q8K0S9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Snapc1Q8K0S9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Snapc1Q8K0S9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Snapc1Q8K0S9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Snapc1Q8K0S9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Snapc1Q8K0S9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 235.1 ms