Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Slc44a2Q8BY89 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc44a2Q8BY89 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc44a2Q8BY89 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Slc44a2Q8BY89 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Slc44a2Q8BY89 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Slc44a2Q8BY89 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc44a2Q8BY89 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc44a2Q8BY89 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.33■□□□□ 0.85
Slc44a2Q8BY89 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.33■□□□□ 0.85
Slc44a2Q8BY89 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Slc44a2Q8BY89 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc44a2Q8BY89 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Slc44a2Q8BY89 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc44a2Q8BY89 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc44a2Q8BY89 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc44a2Q8BY89 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc44a2Q8BY89 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Slc44a2Q8BY89 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Slc44a2Q8BY89 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc44a2Q8BY89 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc44a2Q8BY89 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc44a2Q8BY89 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc44a2Q8BY89 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc44a2Q8BY89 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc44a2Q8BY89 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc44a2Q8BY89 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc44a2Q8BY89 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc44a2Q8BY89 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc44a2Q8BY89 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc44a2Q8BY89 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc44a2Q8BY89 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc44a2Q8BY89 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc44a2Q8BY89 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.3■□□□□ 0.84
Slc44a2Q8BY89 Gm44428-201ENSMUST00000204474 874 ntBASIC20.3■□□□□ 0.84
Slc44a2Q8BY89 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc44a2Q8BY89 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.3■□□□□ 0.84
Slc44a2Q8BY89 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc44a2Q8BY89 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc44a2Q8BY89 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc44a2Q8BY89 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.29■□□□□ 0.84
Slc44a2Q8BY89 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc44a2Q8BY89 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Slc44a2Q8BY89 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Slc44a2Q8BY89 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a2Q8BY89 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Slc44a2Q8BY89 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a2Q8BY89 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Slc44a2Q8BY89 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
Slc44a2Q8BY89 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a2Q8BY89 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a2Q8BY89 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a2Q8BY89 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a2Q8BY89 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc44a2Q8BY89 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a2Q8BY89 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a2Q8BY89 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a2Q8BY89 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a2Q8BY89 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a2Q8BY89 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a2Q8BY89 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a2Q8BY89 Mir6538-201ENSMUST00000183713 110 ntBASIC20.27■□□□□ 0.84
Slc44a2Q8BY89 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc44a2Q8BY89 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Slc44a2Q8BY89 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
Slc44a2Q8BY89 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc44a2Q8BY89 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Slc44a2Q8BY89 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a2Q8BY89 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a2Q8BY89 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a2Q8BY89 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Slc44a2Q8BY89 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc44a2Q8BY89 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a2Q8BY89 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a2Q8BY89 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.25■□□□□ 0.83
Slc44a2Q8BY89 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a2Q8BY89 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc44a2Q8BY89 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Slc44a2Q8BY89 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a2Q8BY89 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a2Q8BY89 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a2Q8BY89 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a2Q8BY89 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.24■□□□□ 0.83
Slc44a2Q8BY89 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc44a2Q8BY89 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Slc44a2Q8BY89 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.24■□□□□ 0.83
Slc44a2Q8BY89 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Slc44a2Q8BY89 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a2Q8BY89 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a2Q8BY89 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a2Q8BY89 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a2Q8BY89 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a2Q8BY89 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a2Q8BY89 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a2Q8BY89 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a2Q8BY89 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Slc44a2Q8BY89 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Slc44a2Q8BY89 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc44a2Q8BY89 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc44a2Q8BY89 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms