Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Scfd1Q8BRF7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Scfd1Q8BRF7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC24.29■■□□□ 1.48
Scfd1Q8BRF7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.29■■□□□ 1.48
Scfd1Q8BRF7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Scfd1Q8BRF7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Scfd1Q8BRF7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Scfd1Q8BRF7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
Scfd1Q8BRF7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Scfd1Q8BRF7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Scfd1Q8BRF7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Scfd1Q8BRF7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Scfd1Q8BRF7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Scfd1Q8BRF7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.27■■□□□ 1.48
Scfd1Q8BRF7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.27■■□□□ 1.48
Scfd1Q8BRF7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Scfd1Q8BRF7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scfd1Q8BRF7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Scfd1Q8BRF7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scfd1Q8BRF7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Scfd1Q8BRF7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Scfd1Q8BRF7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.26■■□□□ 1.47
Scfd1Q8BRF7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Scfd1Q8BRF7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Scfd1Q8BRF7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Scfd1Q8BRF7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC24.25■■□□□ 1.47
Scfd1Q8BRF7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC24.25■■□□□ 1.47
Scfd1Q8BRF7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.25■■□□□ 1.47
Scfd1Q8BRF7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Scfd1Q8BRF7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Scfd1Q8BRF7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Scfd1Q8BRF7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC24.24■■□□□ 1.47
Scfd1Q8BRF7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24.24■■□□□ 1.47
Scfd1Q8BRF7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Scfd1Q8BRF7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Scfd1Q8BRF7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Scfd1Q8BRF7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Scfd1Q8BRF7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Scfd1Q8BRF7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Scfd1Q8BRF7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Scfd1Q8BRF7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC24.23■■□□□ 1.47
Scfd1Q8BRF7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Scfd1Q8BRF7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Scfd1Q8BRF7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scfd1Q8BRF7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scfd1Q8BRF7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scfd1Q8BRF7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC24.22■■□□□ 1.47
Scfd1Q8BRF7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
Scfd1Q8BRF7 Golgb1-201ENSMUST00000023534 498 ntBASIC24.22■■□□□ 1.47
Scfd1Q8BRF7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scfd1Q8BRF7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scfd1Q8BRF7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Scfd1Q8BRF7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scfd1Q8BRF7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scfd1Q8BRF7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Scfd1Q8BRF7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Scfd1Q8BRF7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Scfd1Q8BRF7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Scfd1Q8BRF7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Scfd1Q8BRF7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Scfd1Q8BRF7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Scfd1Q8BRF7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Scfd1Q8BRF7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Scfd1Q8BRF7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Scfd1Q8BRF7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.19■■□□□ 1.46
Scfd1Q8BRF7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.19■■□□□ 1.46
Scfd1Q8BRF7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.18■■□□□ 1.46
Scfd1Q8BRF7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Scfd1Q8BRF7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Scfd1Q8BRF7 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.18■■□□□ 1.46
Scfd1Q8BRF7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Scfd1Q8BRF7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Scfd1Q8BRF7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Scfd1Q8BRF7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Scfd1Q8BRF7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Scfd1Q8BRF7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Scfd1Q8BRF7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Scfd1Q8BRF7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Scfd1Q8BRF7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Scfd1Q8BRF7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Scfd1Q8BRF7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Scfd1Q8BRF7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Scfd1Q8BRF7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC24.16■■□□□ 1.46
Scfd1Q8BRF7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC24.16■■□□□ 1.46
Scfd1Q8BRF7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.15■■□□□ 1.46
Scfd1Q8BRF7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Scfd1Q8BRF7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Scfd1Q8BRF7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC24.15■■□□□ 1.46
Scfd1Q8BRF7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Scfd1Q8BRF7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Scfd1Q8BRF7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Scfd1Q8BRF7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Scfd1Q8BRF7 Gm9870-201ENSMUST00000063874 645 ntBASIC24.14■■□□□ 1.45
Scfd1Q8BRF7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.45
Scfd1Q8BRF7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Scfd1Q8BRF7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Scfd1Q8BRF7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC24.13■■□□□ 1.45
Scfd1Q8BRF7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Scfd1Q8BRF7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Scfd1Q8BRF7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms