Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
VmacQ8BP01 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
VmacQ8BP01 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
VmacQ8BP01 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
VmacQ8BP01 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
VmacQ8BP01 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
VmacQ8BP01 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.41■■□□□ 1.5
VmacQ8BP01 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
VmacQ8BP01 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
VmacQ8BP01 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
VmacQ8BP01 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
VmacQ8BP01 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
VmacQ8BP01 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
VmacQ8BP01 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.4■■□□□ 1.5
VmacQ8BP01 Gm5812-201ENSMUST00000061073 957 ntBASIC24.4■■□□□ 1.5
VmacQ8BP01 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
VmacQ8BP01 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
VmacQ8BP01 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
VmacQ8BP01 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
VmacQ8BP01 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
VmacQ8BP01 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.39■■□□□ 1.49
VmacQ8BP01 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
VmacQ8BP01 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
VmacQ8BP01 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
VmacQ8BP01 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
VmacQ8BP01 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
VmacQ8BP01 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
VmacQ8BP01 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
VmacQ8BP01 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
VmacQ8BP01 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
VmacQ8BP01 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
VmacQ8BP01 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
VmacQ8BP01 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
VmacQ8BP01 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
VmacQ8BP01 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
VmacQ8BP01 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
VmacQ8BP01 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.35■■□□□ 1.49
VmacQ8BP01 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VmacQ8BP01 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VmacQ8BP01 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VmacQ8BP01 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VmacQ8BP01 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VmacQ8BP01 Gm10399-202ENSMUST00000202768 748 ntBASIC24.34■■□□□ 1.49
VmacQ8BP01 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VmacQ8BP01 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VmacQ8BP01 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
VmacQ8BP01 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
VmacQ8BP01 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.33■■□□□ 1.49
VmacQ8BP01 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
VmacQ8BP01 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
VmacQ8BP01 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.33■■□□□ 1.49
VmacQ8BP01 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.33■■□□□ 1.49
VmacQ8BP01 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC24.33■■□□□ 1.49
VmacQ8BP01 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VmacQ8BP01 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
VmacQ8BP01 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
VmacQ8BP01 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.32■■□□□ 1.48
VmacQ8BP01 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
VmacQ8BP01 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.32■■□□□ 1.48
VmacQ8BP01 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
VmacQ8BP01 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
VmacQ8BP01 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
VmacQ8BP01 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
VmacQ8BP01 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
VmacQ8BP01 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
VmacQ8BP01 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.3■■□□□ 1.48
VmacQ8BP01 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
VmacQ8BP01 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
VmacQ8BP01 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.29■■□□□ 1.48
VmacQ8BP01 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.29■■□□□ 1.48
VmacQ8BP01 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
VmacQ8BP01 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.29■■□□□ 1.48
VmacQ8BP01 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VmacQ8BP01 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
VmacQ8BP01 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VmacQ8BP01 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.28■■□□□ 1.48
VmacQ8BP01 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.28■■□□□ 1.48
VmacQ8BP01 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VmacQ8BP01 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VmacQ8BP01 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
VmacQ8BP01 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
VmacQ8BP01 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VmacQ8BP01 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.27■■□□□ 1.48
VmacQ8BP01 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
VmacQ8BP01 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.27■■□□□ 1.48
VmacQ8BP01 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VmacQ8BP01 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VmacQ8BP01 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
VmacQ8BP01 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VmacQ8BP01 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
VmacQ8BP01 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VmacQ8BP01 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VmacQ8BP01 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.26■■□□□ 1.47
VmacQ8BP01 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.26■■□□□ 1.47
VmacQ8BP01 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VmacQ8BP01 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VmacQ8BP01 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
VmacQ8BP01 Gm15546-201ENSMUST00000122095 826 ntBASIC24.25■■□□□ 1.47
VmacQ8BP01 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
VmacQ8BP01 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms