Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.35■□□□□ 0.53
Cdhr3Q8BL00 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr3Q8BL00 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr3Q8BL00 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr3Q8BL00 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr3Q8BL00 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr3Q8BL00 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr3Q8BL00 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr3Q8BL00 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdhr3Q8BL00 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Cdhr3Q8BL00 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cdhr3Q8BL00 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Cdhr3Q8BL00 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdhr3Q8BL00 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdhr3Q8BL00 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdhr3Q8BL00 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdhr3Q8BL00 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdhr3Q8BL00 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdhr3Q8BL00 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdhr3Q8BL00 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdhr3Q8BL00 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdhr3Q8BL00 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cdhr3Q8BL00 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cdhr3Q8BL00 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdhr3Q8BL00 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cdhr3Q8BL00 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdhr3Q8BL00 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cdhr3Q8BL00 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdhr3Q8BL00 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cdhr3Q8BL00 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.32■□□□□ 0.52
Cdhr3Q8BL00 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdhr3Q8BL00 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdhr3Q8BL00 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdhr3Q8BL00 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cdhr3Q8BL00 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr3Q8BL00 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr3Q8BL00 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdhr3Q8BL00 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr3Q8BL00 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr3Q8BL00 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr3Q8BL00 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr3Q8BL00 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr3Q8BL00 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cdhr3Q8BL00 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdhr3Q8BL00 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cdhr3Q8BL00 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.29■□□□□ 0.52
Cdhr3Q8BL00 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Cdhr3Q8BL00 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdhr3Q8BL00 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdhr3Q8BL00 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cdhr3Q8BL00 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdhr3Q8BL00 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdhr3Q8BL00 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdhr3Q8BL00 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdhr3Q8BL00 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.28■□□□□ 0.52
Cdhr3Q8BL00 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cdhr3Q8BL00 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdhr3Q8BL00 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cdhr3Q8BL00 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdhr3Q8BL00 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdhr3Q8BL00 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdhr3Q8BL00 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Cdhr3Q8BL00 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.27■□□□□ 0.52
Cdhr3Q8BL00 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdhr3Q8BL00 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cdhr3Q8BL00 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdhr3Q8BL00 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cdhr3Q8BL00 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdhr3Q8BL00 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cdhr3Q8BL00 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cdhr3Q8BL00 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr3Q8BL00 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr3Q8BL00 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr3Q8BL00 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr3Q8BL00 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdhr3Q8BL00 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr3Q8BL00 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdhr3Q8BL00 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdhr3Q8BL00 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.25■□□□□ 0.51
Cdhr3Q8BL00 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Cdhr3Q8BL00 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdhr3Q8BL00 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdhr3Q8BL00 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdhr3Q8BL00 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cdhr3Q8BL00 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdhr3Q8BL00 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdhr3Q8BL00 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.24■□□□□ 0.51
Cdhr3Q8BL00 Gm27502-201ENSMUST00000183495 199 ntBASIC18.24■□□□□ 0.51
Cdhr3Q8BL00 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cdhr3Q8BL00 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.24■□□□□ 0.51
Cdhr3Q8BL00 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdhr3Q8BL00 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 464.6 ms