Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Atg4dQ8BGV9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Atg4dQ8BGV9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4dQ8BGV9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4dQ8BGV9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4dQ8BGV9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4dQ8BGV9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.76■□□□□ 0.75
Atg4dQ8BGV9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4dQ8BGV9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4dQ8BGV9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4dQ8BGV9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atg4dQ8BGV9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.75■□□□□ 0.75
Atg4dQ8BGV9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.75■□□□□ 0.75
Atg4dQ8BGV9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.75■□□□□ 0.75
Atg4dQ8BGV9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atg4dQ8BGV9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atg4dQ8BGV9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atg4dQ8BGV9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.74■□□□□ 0.75
Atg4dQ8BGV9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atg4dQ8BGV9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atg4dQ8BGV9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atg4dQ8BGV9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atg4dQ8BGV9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.73■□□□□ 0.75
Atg4dQ8BGV9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atg4dQ8BGV9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.73■□□□□ 0.75
Atg4dQ8BGV9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atg4dQ8BGV9 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.73■□□□□ 0.75
Atg4dQ8BGV9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Atg4dQ8BGV9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atg4dQ8BGV9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.72■□□□□ 0.75
Atg4dQ8BGV9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atg4dQ8BGV9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Atg4dQ8BGV9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atg4dQ8BGV9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Atg4dQ8BGV9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4dQ8BGV9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Atg4dQ8BGV9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4dQ8BGV9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4dQ8BGV9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4dQ8BGV9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4dQ8BGV9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4dQ8BGV9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4dQ8BGV9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4dQ8BGV9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.7■□□□□ 0.74
Atg4dQ8BGV9 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.7■□□□□ 0.74
Atg4dQ8BGV9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4dQ8BGV9 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.7■□□□□ 0.74
Atg4dQ8BGV9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4dQ8BGV9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4dQ8BGV9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.69■□□□□ 0.74
Atg4dQ8BGV9 Gm40881-201ENSMUST00000223397 166 ntBASIC19.69■□□□□ 0.74
Atg4dQ8BGV9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4dQ8BGV9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4dQ8BGV9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4dQ8BGV9 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.69■□□□□ 0.74
Atg4dQ8BGV9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4dQ8BGV9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4dQ8BGV9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4dQ8BGV9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4dQ8BGV9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4dQ8BGV9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.68■□□□□ 0.74
Atg4dQ8BGV9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4dQ8BGV9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4dQ8BGV9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4dQ8BGV9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4dQ8BGV9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4dQ8BGV9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.67■□□□□ 0.74
Atg4dQ8BGV9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Atg4dQ8BGV9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4dQ8BGV9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4dQ8BGV9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4dQ8BGV9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Atg4dQ8BGV9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4dQ8BGV9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Atg4dQ8BGV9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4dQ8BGV9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Atg4dQ8BGV9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4dQ8BGV9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4dQ8BGV9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4dQ8BGV9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4dQ8BGV9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4dQ8BGV9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4dQ8BGV9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Atg4dQ8BGV9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.66■□□□□ 0.74
Atg4dQ8BGV9 Gm9959-201ENSMUST00000068277 390 ntBASIC19.66■□□□□ 0.74
Atg4dQ8BGV9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Atg4dQ8BGV9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg4dQ8BGV9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.65■□□□□ 0.74
Atg4dQ8BGV9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg4dQ8BGV9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg4dQ8BGV9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Atg4dQ8BGV9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg4dQ8BGV9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atg4dQ8BGV9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atg4dQ8BGV9 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.64■□□□□ 0.74
Atg4dQ8BGV9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Atg4dQ8BGV9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.64■□□□□ 0.73
Atg4dQ8BGV9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.64■□□□□ 0.73
Atg4dQ8BGV9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg4dQ8BGV9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms