Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smndc1Q8BGT7 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.17■□□□□ 0.82
Smndc1Q8BGT7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smndc1Q8BGT7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smndc1Q8BGT7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.17■□□□□ 0.82
Smndc1Q8BGT7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.17■□□□□ 0.82
Smndc1Q8BGT7 Gm9812-201ENSMUST00000061934 968 ntBASIC20.17■□□□□ 0.82
Smndc1Q8BGT7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Smndc1Q8BGT7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.17■□□□□ 0.82
Smndc1Q8BGT7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smndc1Q8BGT7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smndc1Q8BGT7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.16■□□□□ 0.82
Smndc1Q8BGT7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smndc1Q8BGT7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smndc1Q8BGT7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Smndc1Q8BGT7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Smndc1Q8BGT7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Smndc1Q8BGT7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smndc1Q8BGT7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.15■□□□□ 0.82
Smndc1Q8BGT7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smndc1Q8BGT7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smndc1Q8BGT7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smndc1Q8BGT7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smndc1Q8BGT7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Smndc1Q8BGT7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Smndc1Q8BGT7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.14■□□□□ 0.82
Smndc1Q8BGT7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.14■□□□□ 0.81
Smndc1Q8BGT7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smndc1Q8BGT7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smndc1Q8BGT7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Smndc1Q8BGT7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smndc1Q8BGT7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smndc1Q8BGT7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Smndc1Q8BGT7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smndc1Q8BGT7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Smndc1Q8BGT7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smndc1Q8BGT7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smndc1Q8BGT7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smndc1Q8BGT7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smndc1Q8BGT7 Gm27502-201ENSMUST00000183495 199 ntBASIC20.13■□□□□ 0.81
Smndc1Q8BGT7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Smndc1Q8BGT7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smndc1Q8BGT7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
Smndc1Q8BGT7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smndc1Q8BGT7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.12■□□□□ 0.81
Smndc1Q8BGT7 Gm12366-201ENSMUST00000121722 873 ntBASIC20.12■□□□□ 0.81
Smndc1Q8BGT7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.12■□□□□ 0.81
Smndc1Q8BGT7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smndc1Q8BGT7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.12■□□□□ 0.81
Smndc1Q8BGT7 Gm5786-201ENSMUST00000085368 882 ntBASIC20.12■□□□□ 0.81
Smndc1Q8BGT7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smndc1Q8BGT7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smndc1Q8BGT7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smndc1Q8BGT7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smndc1Q8BGT7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smndc1Q8BGT7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.1■□□□□ 0.81
Smndc1Q8BGT7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smndc1Q8BGT7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smndc1Q8BGT7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Smndc1Q8BGT7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smndc1Q8BGT7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smndc1Q8BGT7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smndc1Q8BGT7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smndc1Q8BGT7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smndc1Q8BGT7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smndc1Q8BGT7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smndc1Q8BGT7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smndc1Q8BGT7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smndc1Q8BGT7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smndc1Q8BGT7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smndc1Q8BGT7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smndc1Q8BGT7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smndc1Q8BGT7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smndc1Q8BGT7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smndc1Q8BGT7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smndc1Q8BGT7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Smndc1Q8BGT7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Smndc1Q8BGT7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smndc1Q8BGT7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smndc1Q8BGT7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smndc1Q8BGT7 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.07■□□□□ 0.8
Smndc1Q8BGT7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smndc1Q8BGT7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smndc1Q8BGT7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smndc1Q8BGT7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smndc1Q8BGT7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smndc1Q8BGT7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms