Protein–RNA interactions for Protein: Q8BGR5

Fam53b, Protein FAM53B, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53bQ8BGR5 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.58■□□□□ 0.57
Fam53bQ8BGR5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Fam53bQ8BGR5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fam53bQ8BGR5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Fam53bQ8BGR5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fam53bQ8BGR5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.56
Fam53bQ8BGR5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam53bQ8BGR5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam53bQ8BGR5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Fam53bQ8BGR5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Fam53bQ8BGR5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam53bQ8BGR5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Fam53bQ8BGR5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.56■□□□□ 0.56
Fam53bQ8BGR5 Gm43566-201ENSMUST00000196851 808 ntBASIC18.56■□□□□ 0.56
Fam53bQ8BGR5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.56■□□□□ 0.56
Fam53bQ8BGR5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam53bQ8BGR5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.56■□□□□ 0.56
Fam53bQ8BGR5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam53bQ8BGR5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam53bQ8BGR5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam53bQ8BGR5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Fam53bQ8BGR5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Fam53bQ8BGR5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.55■□□□□ 0.56
Fam53bQ8BGR5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.55■□□□□ 0.56
Fam53bQ8BGR5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.55■□□□□ 0.56
Fam53bQ8BGR5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fam53bQ8BGR5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam53bQ8BGR5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam53bQ8BGR5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam53bQ8BGR5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam53bQ8BGR5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam53bQ8BGR5 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.53■□□□□ 0.56
Fam53bQ8BGR5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam53bQ8BGR5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam53bQ8BGR5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Fam53bQ8BGR5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.53■□□□□ 0.56
Fam53bQ8BGR5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Fam53bQ8BGR5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam53bQ8BGR5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Fam53bQ8BGR5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Fam53bQ8BGR5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Fam53bQ8BGR5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam53bQ8BGR5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam53bQ8BGR5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam53bQ8BGR5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam53bQ8BGR5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam53bQ8BGR5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam53bQ8BGR5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam53bQ8BGR5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.51■□□□□ 0.55
Fam53bQ8BGR5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam53bQ8BGR5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.51■□□□□ 0.55
Fam53bQ8BGR5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam53bQ8BGR5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam53bQ8BGR5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam53bQ8BGR5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Fam53bQ8BGR5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam53bQ8BGR5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam53bQ8BGR5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Fam53bQ8BGR5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.5■□□□□ 0.55
Fam53bQ8BGR5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Fam53bQ8BGR5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam53bQ8BGR5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam53bQ8BGR5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam53bQ8BGR5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Fam53bQ8BGR5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam53bQ8BGR5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.49■□□□□ 0.55
Fam53bQ8BGR5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fam53bQ8BGR5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fam53bQ8BGR5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fam53bQ8BGR5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fam53bQ8BGR5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fam53bQ8BGR5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam53bQ8BGR5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam53bQ8BGR5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Fam53bQ8BGR5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam53bQ8BGR5 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms