Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Usp6nlQ80XC3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Usp6nlQ80XC3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Usp6nlQ80XC3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Usp6nlQ80XC3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Usp6nlQ80XC3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Usp6nlQ80XC3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Usp6nlQ80XC3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Usp6nlQ80XC3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Usp6nlQ80XC3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Usp6nlQ80XC3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Usp6nlQ80XC3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.36■■□□□ 1.33
Usp6nlQ80XC3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Usp6nlQ80XC3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.36■■□□□ 1.33
Usp6nlQ80XC3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC23.36■■□□□ 1.33
Usp6nlQ80XC3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Usp6nlQ80XC3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Usp6nlQ80XC3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC23.36■■□□□ 1.33
Usp6nlQ80XC3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.36■■□□□ 1.33
Usp6nlQ80XC3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Usp6nlQ80XC3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Usp6nlQ80XC3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Usp6nlQ80XC3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
Usp6nlQ80XC3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Usp6nlQ80XC3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Usp6nlQ80XC3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Usp6nlQ80XC3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Usp6nlQ80XC3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Usp6nlQ80XC3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Usp6nlQ80XC3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Usp6nlQ80XC3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Usp6nlQ80XC3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Usp6nlQ80XC3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Usp6nlQ80XC3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Usp6nlQ80XC3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Usp6nlQ80XC3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.33■■□□□ 1.33
Usp6nlQ80XC3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
Usp6nlQ80XC3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Usp6nlQ80XC3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Usp6nlQ80XC3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp6nlQ80XC3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp6nlQ80XC3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp6nlQ80XC3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp6nlQ80XC3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp6nlQ80XC3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Usp6nlQ80XC3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Usp6nlQ80XC3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp6nlQ80XC3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp6nlQ80XC3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp6nlQ80XC3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Usp6nlQ80XC3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Usp6nlQ80XC3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Usp6nlQ80XC3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Usp6nlQ80XC3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Usp6nlQ80XC3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.3■■□□□ 1.32
Usp6nlQ80XC3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Usp6nlQ80XC3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Usp6nlQ80XC3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Usp6nlQ80XC3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Usp6nlQ80XC3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Usp6nlQ80XC3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC23.29■■□□□ 1.32
Usp6nlQ80XC3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Usp6nlQ80XC3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Usp6nlQ80XC3 Gm6139-201ENSMUST00000079261 882 ntBASIC23.29■■□□□ 1.32
Usp6nlQ80XC3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.29■■□□□ 1.32
Usp6nlQ80XC3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp6nlQ80XC3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
Usp6nlQ80XC3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Usp6nlQ80XC3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Usp6nlQ80XC3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Usp6nlQ80XC3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Usp6nlQ80XC3 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.27■■□□□ 1.32
Usp6nlQ80XC3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
Usp6nlQ80XC3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC23.26■■□□□ 1.31
Usp6nlQ80XC3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp6nlQ80XC3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.26■■□□□ 1.31
Usp6nlQ80XC3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp6nlQ80XC3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC23.26■■□□□ 1.31
Usp6nlQ80XC3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp6nlQ80XC3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.25■■□□□ 1.31
Usp6nlQ80XC3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp6nlQ80XC3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp6nlQ80XC3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Usp6nlQ80XC3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Usp6nlQ80XC3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp6nlQ80XC3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp6nlQ80XC3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Usp6nlQ80XC3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Usp6nlQ80XC3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Usp6nlQ80XC3 Gm8495-201ENSMUST00000188740 694 ntBASIC23.23■■□□□ 1.31
Usp6nlQ80XC3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.23■■□□□ 1.31
Usp6nlQ80XC3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Usp6nlQ80XC3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Usp6nlQ80XC3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.23■■□□□ 1.31
Usp6nlQ80XC3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Usp6nlQ80XC3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Usp6nlQ80XC3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Usp6nlQ80XC3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.23■■□□□ 1.31
Usp6nlQ80XC3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms