Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm10399-202ENSMUST00000202768 748 ntBASIC20.66■□□□□ 0.9
VclQ64727 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
VclQ64727 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.66■□□□□ 0.9
VclQ64727 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VclQ64727 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VclQ64727 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VclQ64727 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.65■□□□□ 0.9
VclQ64727 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.65■□□□□ 0.9
VclQ64727 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.65■□□□□ 0.9
VclQ64727 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VclQ64727 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
VclQ64727 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.64■□□□□ 0.9
VclQ64727 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VclQ64727 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VclQ64727 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
VclQ64727 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
VclQ64727 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VclQ64727 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VclQ64727 Etf1-202ENSMUST00000180351 108 ntBASIC20.64■□□□□ 0.89
VclQ64727 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VclQ64727 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VclQ64727 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VclQ64727 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VclQ64727 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VclQ64727 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VclQ64727 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.63■□□□□ 0.89
VclQ64727 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.63■□□□□ 0.89
VclQ64727 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.63■□□□□ 0.89
VclQ64727 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VclQ64727 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VclQ64727 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
VclQ64727 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.62■□□□□ 0.89
VclQ64727 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.62■□□□□ 0.89
VclQ64727 Gm45102-201ENSMUST00000207427 857 ntBASIC20.62■□□□□ 0.89
VclQ64727 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
VclQ64727 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.62■□□□□ 0.89
VclQ64727 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
VclQ64727 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
VclQ64727 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VclQ64727 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
VclQ64727 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Gm9959-201ENSMUST00000068277 390 ntBASIC20.61■□□□□ 0.89
VclQ64727 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VclQ64727 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.6■□□□□ 0.89
VclQ64727 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
VclQ64727 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
VclQ64727 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VclQ64727 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.6■□□□□ 0.89
VclQ64727 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.6■□□□□ 0.89
VclQ64727 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VclQ64727 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
VclQ64727 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VclQ64727 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.59■□□□□ 0.89
VclQ64727 Gm40881-201ENSMUST00000223397 166 ntBASIC20.59■□□□□ 0.89
VclQ64727 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.59■□□□□ 0.89
VclQ64727 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
VclQ64727 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VclQ64727 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.58■□□□□ 0.89
VclQ64727 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.58■□□□□ 0.89
VclQ64727 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.58■□□□□ 0.89
VclQ64727 Gm7417-201ENSMUST00000192950 473 ntBASIC20.58■□□□□ 0.89
VclQ64727 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.58■□□□□ 0.89
VclQ64727 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VclQ64727 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VclQ64727 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
VclQ64727 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.57■□□□□ 0.88
VclQ64727 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.57■□□□□ 0.88
VclQ64727 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
VclQ64727 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VclQ64727 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VclQ64727 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms