Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VcanQ62059 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.26■□□□□ 0.83
VcanQ62059 Gm26833-201ENSMUST00000180899 440 ntBASIC20.26■□□□□ 0.83
VcanQ62059 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.26■□□□□ 0.83
VcanQ62059 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.26■□□□□ 0.83
VcanQ62059 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VcanQ62059 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
VcanQ62059 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
VcanQ62059 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VcanQ62059 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
VcanQ62059 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VcanQ62059 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
VcanQ62059 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VcanQ62059 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VcanQ62059 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VcanQ62059 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VcanQ62059 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.24■□□□□ 0.83
VcanQ62059 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
VcanQ62059 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VcanQ62059 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VcanQ62059 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
VcanQ62059 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VcanQ62059 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VcanQ62059 Gm8493-201ENSMUST00000196881 489 ntBASIC20.23■□□□□ 0.83
VcanQ62059 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VcanQ62059 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VcanQ62059 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
VcanQ62059 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.22■□□□□ 0.83
VcanQ62059 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.22■□□□□ 0.83
VcanQ62059 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VcanQ62059 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.21■□□□□ 0.83
VcanQ62059 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
VcanQ62059 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VcanQ62059 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VcanQ62059 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.21■□□□□ 0.83
VcanQ62059 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.21■□□□□ 0.83
VcanQ62059 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.21■□□□□ 0.83
VcanQ62059 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VcanQ62059 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
VcanQ62059 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VcanQ62059 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VcanQ62059 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VcanQ62059 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.21■□□□□ 0.83
VcanQ62059 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.21■□□□□ 0.83
VcanQ62059 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.21■□□□□ 0.83
VcanQ62059 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VcanQ62059 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.2■□□□□ 0.82
VcanQ62059 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
VcanQ62059 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VcanQ62059 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VcanQ62059 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VcanQ62059 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VcanQ62059 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VcanQ62059 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.19■□□□□ 0.82
VcanQ62059 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VcanQ62059 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VcanQ62059 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.19■□□□□ 0.82
VcanQ62059 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VcanQ62059 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.19■□□□□ 0.82
VcanQ62059 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
VcanQ62059 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VcanQ62059 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.17■□□□□ 0.82
VcanQ62059 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VcanQ62059 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.17■□□□□ 0.82
VcanQ62059 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
VcanQ62059 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
VcanQ62059 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VcanQ62059 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.16■□□□□ 0.82
VcanQ62059 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.16■□□□□ 0.82
VcanQ62059 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
VcanQ62059 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.16■□□□□ 0.82
VcanQ62059 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
VcanQ62059 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VcanQ62059 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VcanQ62059 Gm27801-201ENSMUST00000184174 223 ntBASIC20.15■□□□□ 0.82
VcanQ62059 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
VcanQ62059 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VcanQ62059 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
VcanQ62059 Nespas-201ENSMUST00000143738 1083 ntBASIC20.14■□□□□ 0.82
VcanQ62059 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.14■□□□□ 0.82
VcanQ62059 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
VcanQ62059 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VcanQ62059 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VcanQ62059 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VcanQ62059 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
VcanQ62059 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
VcanQ62059 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.14■□□□□ 0.81
VcanQ62059 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VcanQ62059 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
VcanQ62059 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
VcanQ62059 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
VcanQ62059 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VcanQ62059 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VcanQ62059 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VcanQ62059 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
VcanQ62059 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
VcanQ62059 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
VcanQ62059 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
VcanQ62059 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VcanQ62059 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms