Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-3Q5R1I1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-3Q5R1I1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav7d-3Q5R1I1 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.38■□□□□ 0.05
Trav7d-3Q5R1I1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-3Q5R1I1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trav7d-3Q5R1I1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-3Q5R1I1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav7d-3Q5R1I1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav7d-3Q5R1I1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-3Q5R1I1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-3Q5R1I1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-3Q5R1I1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-3Q5R1I1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-3Q5R1I1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7d-3Q5R1I1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7d-3Q5R1I1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav7d-3Q5R1I1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav7d-3Q5R1I1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-3Q5R1I1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-3Q5R1I1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-3Q5R1I1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-3Q5R1I1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-3Q5R1I1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-3Q5R1I1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-3Q5R1I1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-3Q5R1I1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7d-3Q5R1I1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav7d-3Q5R1I1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-3Q5R1I1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-3Q5R1I1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav7d-3Q5R1I1 Gm14523-201ENSMUST00000117260 558 ntBASIC15.34■□□□□ 0.05
Trav7d-3Q5R1I1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav7d-3Q5R1I1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-3Q5R1I1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-3Q5R1I1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-3Q5R1I1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7d-3Q5R1I1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav7d-3Q5R1I1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
Trav7d-3Q5R1I1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7d-3Q5R1I1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Trav7d-3Q5R1I1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trav7d-3Q5R1I1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7d-3Q5R1I1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7d-3Q5R1I1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.33■□□□□ 0.05
Trav7d-3Q5R1I1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7d-3Q5R1I1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7d-3Q5R1I1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7d-3Q5R1I1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7d-3Q5R1I1 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.33■□□□□ 0.04
Trav7d-3Q5R1I1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-3Q5R1I1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-3Q5R1I1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-3Q5R1I1 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.32■□□□□ 0.04
Trav7d-3Q5R1I1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav7d-3Q5R1I1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-3Q5R1I1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav7d-3Q5R1I1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-3Q5R1I1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-3Q5R1I1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-3Q5R1I1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trav7d-3Q5R1I1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-3Q5R1I1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-3Q5R1I1 Gm7332-201ENSMUST00000118351 454 ntBASIC15.31■□□□□ 0.04
Trav7d-3Q5R1I1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-3Q5R1I1 Gm27502-201ENSMUST00000183495 199 ntBASIC15.31■□□□□ 0.04
Trav7d-3Q5R1I1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-3Q5R1I1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav7d-3Q5R1I1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-3Q5R1I1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-3Q5R1I1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-3Q5R1I1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-3Q5R1I1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-3Q5R1I1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav7d-3Q5R1I1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav7d-3Q5R1I1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Trav7d-3Q5R1I1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav7d-3Q5R1I1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav7d-3Q5R1I1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-3Q5R1I1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-3Q5R1I1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-3Q5R1I1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-3Q5R1I1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-3Q5R1I1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav7d-3Q5R1I1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-3Q5R1I1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav7d-3Q5R1I1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-3Q5R1I1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms