Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Fndc4Q3TR08 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fndc4Q3TR08 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fndc4Q3TR08 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Fndc4Q3TR08 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fndc4Q3TR08 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fndc4Q3TR08 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fndc4Q3TR08 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fndc4Q3TR08 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Fndc4Q3TR08 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fndc4Q3TR08 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fndc4Q3TR08 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Fndc4Q3TR08 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fndc4Q3TR08 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fndc4Q3TR08 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fndc4Q3TR08 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fndc4Q3TR08 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Fndc4Q3TR08 Gm14523-201ENSMUST00000117260 558 ntBASIC17.77■□□□□ 0.44
Fndc4Q3TR08 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.77■□□□□ 0.44
Fndc4Q3TR08 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.77■□□□□ 0.43
Fndc4Q3TR08 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Fndc4Q3TR08 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Fndc4Q3TR08 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Fndc4Q3TR08 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Fndc4Q3TR08 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Fndc4Q3TR08 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Fndc4Q3TR08 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fndc4Q3TR08 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Fndc4Q3TR08 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Fndc4Q3TR08 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Fndc4Q3TR08 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fndc4Q3TR08 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fndc4Q3TR08 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fndc4Q3TR08 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Gm12366-201ENSMUST00000121722 873 ntBASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Gm5786-201ENSMUST00000085368 882 ntBASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Fndc4Q3TR08 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fndc4Q3TR08 Gm7332-201ENSMUST00000118351 454 ntBASIC17.74■□□□□ 0.43
Fndc4Q3TR08 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.74■□□□□ 0.43
Fndc4Q3TR08 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fndc4Q3TR08 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fndc4Q3TR08 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Fndc4Q3TR08 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fndc4Q3TR08 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fndc4Q3TR08 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fndc4Q3TR08 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.73■□□□□ 0.43
Fndc4Q3TR08 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Fndc4Q3TR08 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.72■□□□□ 0.43
Fndc4Q3TR08 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Fndc4Q3TR08 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fndc4Q3TR08 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fndc4Q3TR08 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fndc4Q3TR08 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fndc4Q3TR08 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fndc4Q3TR08 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Fndc4Q3TR08 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.71■□□□□ 0.43
Fndc4Q3TR08 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Fndc4Q3TR08 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fndc4Q3TR08 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fndc4Q3TR08 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fndc4Q3TR08 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.71■□□□□ 0.43
Fndc4Q3TR08 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fndc4Q3TR08 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fndc4Q3TR08 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fndc4Q3TR08 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.7■□□□□ 0.42
Fndc4Q3TR08 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Fndc4Q3TR08 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fndc4Q3TR08 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.7■□□□□ 0.42
Fndc4Q3TR08 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fndc4Q3TR08 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fndc4Q3TR08 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.7■□□□□ 0.42
Fndc4Q3TR08 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fndc4Q3TR08 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fndc4Q3TR08 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms