Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Khdc4Q3TCX3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Khdc4Q3TCX3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Khdc4Q3TCX3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Khdc4Q3TCX3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.94■□□□□ 0.78
Khdc4Q3TCX3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.94■□□□□ 0.78
Khdc4Q3TCX3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Khdc4Q3TCX3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Khdc4Q3TCX3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Khdc4Q3TCX3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Khdc4Q3TCX3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Khdc4Q3TCX3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Khdc4Q3TCX3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Khdc4Q3TCX3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Khdc4Q3TCX3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Khdc4Q3TCX3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Khdc4Q3TCX3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Khdc4Q3TCX3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Khdc4Q3TCX3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Khdc4Q3TCX3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Khdc4Q3TCX3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Khdc4Q3TCX3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Khdc4Q3TCX3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Khdc4Q3TCX3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.92■□□□□ 0.78
Khdc4Q3TCX3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Khdc4Q3TCX3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Khdc4Q3TCX3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Khdc4Q3TCX3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Khdc4Q3TCX3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.91■□□□□ 0.78
Khdc4Q3TCX3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Khdc4Q3TCX3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Khdc4Q3TCX3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Khdc4Q3TCX3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Khdc4Q3TCX3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Khdc4Q3TCX3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Khdc4Q3TCX3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Khdc4Q3TCX3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Khdc4Q3TCX3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Khdc4Q3TCX3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Khdc4Q3TCX3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Khdc4Q3TCX3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Khdc4Q3TCX3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Khdc4Q3TCX3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Khdc4Q3TCX3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.89■□□□□ 0.77
Khdc4Q3TCX3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.89■□□□□ 0.77
Khdc4Q3TCX3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Khdc4Q3TCX3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Khdc4Q3TCX3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Khdc4Q3TCX3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Khdc4Q3TCX3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Khdc4Q3TCX3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Khdc4Q3TCX3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Khdc4Q3TCX3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.88■□□□□ 0.77
Khdc4Q3TCX3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Khdc4Q3TCX3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Khdc4Q3TCX3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.88■□□□□ 0.77
Khdc4Q3TCX3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Khdc4Q3TCX3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Khdc4Q3TCX3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Khdc4Q3TCX3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Khdc4Q3TCX3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.87■□□□□ 0.77
Khdc4Q3TCX3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc4Q3TCX3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc4Q3TCX3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc4Q3TCX3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc4Q3TCX3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc4Q3TCX3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc4Q3TCX3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.86■□□□□ 0.77
Khdc4Q3TCX3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.86■□□□□ 0.77
Khdc4Q3TCX3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Khdc4Q3TCX3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Khdc4Q3TCX3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Khdc4Q3TCX3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Khdc4Q3TCX3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Khdc4Q3TCX3 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.85■□□□□ 0.77
Khdc4Q3TCX3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.85■□□□□ 0.77
Khdc4Q3TCX3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.85■□□□□ 0.77
Khdc4Q3TCX3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Khdc4Q3TCX3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Khdc4Q3TCX3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Khdc4Q3TCX3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Khdc4Q3TCX3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Khdc4Q3TCX3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Khdc4Q3TCX3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Khdc4Q3TCX3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.84■□□□□ 0.77
Khdc4Q3TCX3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Khdc4Q3TCX3 Gm40881-201ENSMUST00000223397 166 ntBASIC19.84■□□□□ 0.77
Khdc4Q3TCX3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Khdc4Q3TCX3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Khdc4Q3TCX3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Khdc4Q3TCX3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Khdc4Q3TCX3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Khdc4Q3TCX3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Khdc4Q3TCX3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.83■□□□□ 0.77
Khdc4Q3TCX3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Khdc4Q3TCX3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Khdc4Q3TCX3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.82■□□□□ 0.76
Khdc4Q3TCX3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Khdc4Q3TCX3 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.82■□□□□ 0.76
Khdc4Q3TCX3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms