Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Thumpd3P97770 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Thumpd3P97770 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Thumpd3P97770 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.27■■□□□ 1
Thumpd3P97770 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Thumpd3P97770 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Thumpd3P97770 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Thumpd3P97770 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Thumpd3P97770 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Thumpd3P97770 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Thumpd3P97770 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Thumpd3P97770 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Thumpd3P97770 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Thumpd3P97770 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Thumpd3P97770 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Thumpd3P97770 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Thumpd3P97770 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Thumpd3P97770 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Thumpd3P97770 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.25■□□□□ 0.99
Thumpd3P97770 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Thumpd3P97770 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Thumpd3P97770 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Thumpd3P97770 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Thumpd3P97770 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Thumpd3P97770 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Thumpd3P97770 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Thumpd3P97770 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Thumpd3P97770 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.24■□□□□ 0.99
Thumpd3P97770 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Thumpd3P97770 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Thumpd3P97770 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Thumpd3P97770 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Thumpd3P97770 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.23■□□□□ 0.99
Thumpd3P97770 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.23■□□□□ 0.99
Thumpd3P97770 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Thumpd3P97770 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Thumpd3P97770 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Thumpd3P97770 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Thumpd3P97770 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Thumpd3P97770 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.22■□□□□ 0.99
Thumpd3P97770 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Thumpd3P97770 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Thumpd3P97770 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Thumpd3P97770 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Thumpd3P97770 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.21■□□□□ 0.99
Thumpd3P97770 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Thumpd3P97770 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.21■□□□□ 0.99
Thumpd3P97770 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.21■□□□□ 0.99
Thumpd3P97770 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Thumpd3P97770 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Thumpd3P97770 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Thumpd3P97770 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Thumpd3P97770 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Thumpd3P97770 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Thumpd3P97770 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
Thumpd3P97770 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd3P97770 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd3P97770 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd3P97770 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd3P97770 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Thumpd3P97770 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Thumpd3P97770 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.18■□□□□ 0.98
Thumpd3P97770 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Thumpd3P97770 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd3P97770 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd3P97770 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd3P97770 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd3P97770 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd3P97770 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd3P97770 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd3P97770 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd3P97770 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd3P97770 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
Thumpd3P97770 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Thumpd3P97770 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Thumpd3P97770 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Thumpd3P97770 Gm5812-201ENSMUST00000061073 957 ntBASIC21.16■□□□□ 0.98
Thumpd3P97770 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Thumpd3P97770 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Thumpd3P97770 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Thumpd3P97770 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Thumpd3P97770 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Thumpd3P97770 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Thumpd3P97770 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Thumpd3P97770 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Thumpd3P97770 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Thumpd3P97770 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Thumpd3P97770 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Thumpd3P97770 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Thumpd3P97770 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Thumpd3P97770 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Thumpd3P97770 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Thumpd3P97770 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Thumpd3P97770 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Thumpd3P97770 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.12■□□□□ 0.97
Thumpd3P97770 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Thumpd3P97770 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Thumpd3P97770 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Thumpd3P97770 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Thumpd3P97770 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms