Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1aP97445 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1aP97445 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1aP97445 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
Cacna1aP97445 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1aP97445 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cacna1aP97445 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1aP97445 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Cacna1aP97445 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1aP97445 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.53■□□□□ 0.72
Cacna1aP97445 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.53■□□□□ 0.72
Cacna1aP97445 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1aP97445 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.53■□□□□ 0.72
Cacna1aP97445 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1aP97445 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.52■□□□□ 0.72
Cacna1aP97445 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cacna1aP97445 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1aP97445 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1aP97445 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1aP97445 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cacna1aP97445 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cacna1aP97445 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cacna1aP97445 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1aP97445 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1aP97445 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1aP97445 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1aP97445 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cacna1aP97445 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1aP97445 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cacna1aP97445 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.51■□□□□ 0.71
Cacna1aP97445 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1aP97445 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1aP97445 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1aP97445 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cacna1aP97445 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.5■□□□□ 0.71
Cacna1aP97445 Gm26571-201ENSMUST00000181399 666 ntBASIC19.5■□□□□ 0.71
Cacna1aP97445 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Cacna1aP97445 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1aP97445 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1aP97445 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1aP97445 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1aP97445 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1aP97445 Gm43137-201ENSMUST00000198052 594 ntBASIC19.49■□□□□ 0.71
Cacna1aP97445 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1aP97445 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cacna1aP97445 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1aP97445 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1aP97445 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1aP97445 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1aP97445 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.48■□□□□ 0.71
Cacna1aP97445 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1aP97445 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cacna1aP97445 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.48■□□□□ 0.71
Cacna1aP97445 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cacna1aP97445 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1aP97445 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cacna1aP97445 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1aP97445 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1aP97445 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1aP97445 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1aP97445 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1aP97445 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.47■□□□□ 0.71
Cacna1aP97445 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.47■□□□□ 0.71
Cacna1aP97445 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cacna1aP97445 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1aP97445 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Cacna1aP97445 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.46■□□□□ 0.71
Cacna1aP97445 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1aP97445 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Cacna1aP97445 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1aP97445 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1aP97445 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cacna1aP97445 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1aP97445 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1aP97445 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1aP97445 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1aP97445 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cacna1aP97445 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.45■□□□□ 0.7
Cacna1aP97445 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cacna1aP97445 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Cacna1aP97445 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.45■□□□□ 0.7
Cacna1aP97445 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1aP97445 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cacna1aP97445 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1aP97445 Gm27405-201ENSMUST00000184201 112 ntBASIC19.44■□□□□ 0.7
Cacna1aP97445 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1aP97445 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1aP97445 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1aP97445 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1aP97445 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1aP97445 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cacna1aP97445 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1aP97445 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1aP97445 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1aP97445 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Cacna1aP97445 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1aP97445 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1aP97445 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1aP97445 Gm12251-201ENSMUST00000117893 792 ntBASIC19.43■□□□□ 0.7
Cacna1aP97445 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms