Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.26■□□□□ 0.19
Pfn1P62962 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pfn1P62962 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pfn1P62962 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pfn1P62962 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pfn1P62962 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pfn1P62962 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pfn1P62962 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pfn1P62962 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pfn1P62962 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pfn1P62962 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pfn1P62962 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pfn1P62962 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pfn1P62962 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pfn1P62962 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pfn1P62962 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pfn1P62962 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pfn1P62962 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pfn1P62962 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.24■□□□□ 0.19
Pfn1P62962 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pfn1P62962 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pfn1P62962 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pfn1P62962 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfn1P62962 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfn1P62962 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pfn1P62962 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfn1P62962 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pfn1P62962 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfn1P62962 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.23■□□□□ 0.19
Pfn1P62962 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfn1P62962 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.23■□□□□ 0.19
Pfn1P62962 Gm4799-201ENSMUST00000095396 657 ntBASIC16.23■□□□□ 0.19
Pfn1P62962 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfn1P62962 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfn1P62962 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pfn1P62962 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.23■□□□□ 0.19
Pfn1P62962 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pfn1P62962 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfn1P62962 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pfn1P62962 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.23■□□□□ 0.19
Pfn1P62962 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.22■□□□□ 0.19
Pfn1P62962 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pfn1P62962 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfn1P62962 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.22■□□□□ 0.19
Pfn1P62962 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.22■□□□□ 0.19
Pfn1P62962 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.22■□□□□ 0.19
Pfn1P62962 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfn1P62962 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pfn1P62962 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Pfn1P62962 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pfn1P62962 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.22■□□□□ 0.19
Pfn1P62962 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfn1P62962 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfn1P62962 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pfn1P62962 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pfn1P62962 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
Pfn1P62962 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pfn1P62962 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pfn1P62962 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pfn1P62962 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pfn1P62962 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pfn1P62962 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pfn1P62962 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pfn1P62962 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Pfn1P62962 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.2■□□□□ 0.18
Pfn1P62962 Gm9812-201ENSMUST00000061934 968 ntBASIC16.2■□□□□ 0.18
Pfn1P62962 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pfn1P62962 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfn1P62962 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfn1P62962 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.2■□□□□ 0.18
Pfn1P62962 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.2■□□□□ 0.18
Pfn1P62962 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfn1P62962 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pfn1P62962 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pfn1P62962 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pfn1P62962 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfn1P62962 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfn1P62962 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfn1P62962 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfn1P62962 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfn1P62962 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pfn1P62962 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pfn1P62962 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.19■□□□□ 0.18
Pfn1P62962 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pfn1P62962 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfn1P62962 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pfn1P62962 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.19■□□□□ 0.18
Pfn1P62962 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfn1P62962 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfn1P62962 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfn1P62962 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pfn1P62962 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfn1P62962 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pfn1P62962 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfn1P62962 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pfn1P62962 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfn1P62962 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfn1P62962 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pfn1P62962 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pfn1P62962 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms