Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm3P62311 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm3P62311 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm3P62311 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsm3P62311 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Lsm3P62311 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsm3P62311 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm3P62311 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm3P62311 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm3P62311 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm3P62311 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsm3P62311 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm3P62311 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm3P62311 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm3P62311 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm3P62311 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm3P62311 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm3P62311 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsm3P62311 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm3P62311 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm3P62311 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm3P62311 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm3P62311 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Lsm3P62311 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm3P62311 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm3P62311 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm3P62311 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm3P62311 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.11■□□□□ 0.65
Lsm3P62311 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm3P62311 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.11■□□□□ 0.65
Lsm3P62311 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm3P62311 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm3P62311 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm3P62311 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm3P62311 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm3P62311 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.09■□□□□ 0.65
Lsm3P62311 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.09■□□□□ 0.65
Lsm3P62311 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm3P62311 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm3P62311 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm3P62311 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm3P62311 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm3P62311 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Lsm3P62311 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lsm3P62311 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Lsm3P62311 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lsm3P62311 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Lsm3P62311 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Lsm3P62311 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Lsm3P62311 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Lsm3P62311 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm3P62311 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm3P62311 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Lsm3P62311 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm3P62311 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm3P62311 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.06■□□□□ 0.64
Lsm3P62311 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm3P62311 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm3P62311 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm3P62311 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Lsm3P62311 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.06■□□□□ 0.64
Lsm3P62311 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm3P62311 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm3P62311 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.06■□□□□ 0.64
Lsm3P62311 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm3P62311 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm3P62311 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm3P62311 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Lsm3P62311 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm3P62311 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm3P62311 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Lsm3P62311 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Lsm3P62311 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm3P62311 Gm45855-201ENSMUST00000212546 880 ntBASIC19.05■□□□□ 0.64
Lsm3P62311 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Lsm3P62311 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm3P62311 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm3P62311 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm3P62311 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm3P62311 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm3P62311 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm3P62311 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lsm3P62311 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Lsm3P62311 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm3P62311 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Lsm3P62311 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm3P62311 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Lsm3P62311 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm3P62311 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm3P62311 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.03■□□□□ 0.64
Lsm3P62311 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm3P62311 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm3P62311 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm3P62311 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm3P62311 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm3P62311 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm3P62311 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.03■□□□□ 0.64
Lsm3P62311 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.03■□□□□ 0.64
Lsm3P62311 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.03■□□□□ 0.64
Lsm3P62311 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms