Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx4P53776 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx4P53776 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx4P53776 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx4P53776 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lhx4P53776 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.69■□□□□ 0.42
Lhx4P53776 Gm43566-201ENSMUST00000196851 808 ntBASIC17.69■□□□□ 0.42
Lhx4P53776 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx4P53776 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx4P53776 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx4P53776 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx4P53776 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx4P53776 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx4P53776 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx4P53776 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx4P53776 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Lhx4P53776 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.68■□□□□ 0.42
Lhx4P53776 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.68■□□□□ 0.42
Lhx4P53776 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx4P53776 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.68■□□□□ 0.42
Lhx4P53776 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lhx4P53776 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx4P53776 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx4P53776 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx4P53776 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx4P53776 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx4P53776 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lhx4P53776 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lhx4P53776 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.67■□□□□ 0.42
Lhx4P53776 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Lhx4P53776 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Lhx4P53776 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx4P53776 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx4P53776 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Lhx4P53776 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Lhx4P53776 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx4P53776 Gm15546-201ENSMUST00000122095 826 ntBASIC17.66■□□□□ 0.42
Lhx4P53776 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx4P53776 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx4P53776 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx4P53776 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx4P53776 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Lhx4P53776 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx4P53776 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx4P53776 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx4P53776 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Lhx4P53776 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx4P53776 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx4P53776 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx4P53776 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Lhx4P53776 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.65■□□□□ 0.42
Lhx4P53776 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx4P53776 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
Lhx4P53776 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx4P53776 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx4P53776 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx4P53776 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.64■□□□□ 0.42
Lhx4P53776 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Lhx4P53776 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.64■□□□□ 0.41
Lhx4P53776 Gm15820-201ENSMUST00000201566 728 ntBASIC17.64■□□□□ 0.41
Lhx4P53776 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.64■□□□□ 0.41
Lhx4P53776 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx4P53776 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.63■□□□□ 0.41
Lhx4P53776 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.63■□□□□ 0.41
Lhx4P53776 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Lhx4P53776 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx4P53776 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lhx4P53776 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx4P53776 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx4P53776 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx4P53776 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx4P53776 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.62■□□□□ 0.41
Lhx4P53776 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lhx4P53776 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Lhx4P53776 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Lhx4P53776 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx4P53776 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx4P53776 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Lhx4P53776 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx4P53776 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx4P53776 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.61■□□□□ 0.41
Lhx4P53776 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx4P53776 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lhx4P53776 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx4P53776 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx4P53776 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx4P53776 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx4P53776 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx4P53776 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Lhx4P53776 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx4P53776 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lhx4P53776 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.59■□□□□ 0.41
Lhx4P53776 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx4P53776 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx4P53776 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.59■□□□□ 0.41
Lhx4P53776 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx4P53776 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx4P53776 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx4P53776 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx4P53776 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms