Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp9P41245 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp9P41245 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.5■□□□□ 0.39
Mmp9P41245 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp9P41245 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.5■□□□□ 0.39
Mmp9P41245 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp9P41245 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp9P41245 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Mmp9P41245 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.5■□□□□ 0.39
Mmp9P41245 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Mmp9P41245 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.5■□□□□ 0.39
Mmp9P41245 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp9P41245 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp9P41245 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp9P41245 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp9P41245 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Mmp9P41245 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp9P41245 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp9P41245 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp9P41245 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.48■□□□□ 0.39
Mmp9P41245 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.48■□□□□ 0.39
Mmp9P41245 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.48■□□□□ 0.39
Mmp9P41245 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp9P41245 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp9P41245 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp9P41245 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp9P41245 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.47■□□□□ 0.39
Mmp9P41245 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Mmp9P41245 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.47■□□□□ 0.39
Mmp9P41245 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp9P41245 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp9P41245 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Mmp9P41245 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp9P41245 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp9P41245 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp9P41245 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp9P41245 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp9P41245 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp9P41245 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Mmp9P41245 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp9P41245 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Mmp9P41245 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp9P41245 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp9P41245 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Mmp9P41245 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp9P41245 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp9P41245 Gm9812-201ENSMUST00000061934 968 ntBASIC17.45■□□□□ 0.38
Mmp9P41245 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp9P41245 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.45■□□□□ 0.38
Mmp9P41245 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp9P41245 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Mmp9P41245 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp9P41245 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp9P41245 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp9P41245 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp9P41245 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp9P41245 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp9P41245 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp9P41245 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp9P41245 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp9P41245 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp9P41245 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp9P41245 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.43■□□□□ 0.38
Mmp9P41245 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp9P41245 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp9P41245 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Mmp9P41245 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp9P41245 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp9P41245 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp9P41245 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Mmp9P41245 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Mmp9P41245 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp9P41245 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.42■□□□□ 0.38
Mmp9P41245 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp9P41245 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Mmp9P41245 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp9P41245 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp9P41245 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp9P41245 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp9P41245 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp9P41245 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp9P41245 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.41■□□□□ 0.38
Mmp9P41245 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp9P41245 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp9P41245 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.41■□□□□ 0.38
Mmp9P41245 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp9P41245 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp9P41245 Gm4799-201ENSMUST00000095396 657 ntBASIC17.41■□□□□ 0.38
Mmp9P41245 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp9P41245 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp9P41245 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp9P41245 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp9P41245 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp9P41245 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Mmp9P41245 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp9P41245 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Mmp9P41245 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp9P41245 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp9P41245 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp9P41245 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms