Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.12■□□□□ 0.81
Cdh4P39038 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cdh4P39038 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh4P39038 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.11■□□□□ 0.81
Cdh4P39038 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh4P39038 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.11■□□□□ 0.81
Cdh4P39038 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh4P39038 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh4P39038 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cdh4P39038 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh4P39038 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cdh4P39038 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.11■□□□□ 0.81
Cdh4P39038 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh4P39038 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cdh4P39038 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.11■□□□□ 0.81
Cdh4P39038 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh4P39038 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh4P39038 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh4P39038 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh4P39038 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh4P39038 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh4P39038 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.1■□□□□ 0.81
Cdh4P39038 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh4P39038 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh4P39038 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh4P39038 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cdh4P39038 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh4P39038 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.09■□□□□ 0.81
Cdh4P39038 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh4P39038 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh4P39038 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh4P39038 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cdh4P39038 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh4P39038 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh4P39038 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh4P39038 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.08■□□□□ 0.81
Cdh4P39038 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cdh4P39038 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
Cdh4P39038 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.08■□□□□ 0.8
Cdh4P39038 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.08■□□□□ 0.8
Cdh4P39038 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh4P39038 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh4P39038 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh4P39038 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh4P39038 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.07■□□□□ 0.8
Cdh4P39038 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.07■□□□□ 0.8
Cdh4P39038 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh4P39038 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cdh4P39038 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh4P39038 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.06■□□□□ 0.8
Cdh4P39038 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh4P39038 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.06■□□□□ 0.8
Cdh4P39038 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh4P39038 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh4P39038 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.06■□□□□ 0.8
Cdh4P39038 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh4P39038 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh4P39038 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh4P39038 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh4P39038 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.05■□□□□ 0.8
Cdh4P39038 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.05■□□□□ 0.8
Cdh4P39038 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cdh4P39038 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.05■□□□□ 0.8
Cdh4P39038 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh4P39038 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.05■□□□□ 0.8
Cdh4P39038 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh4P39038 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.04■□□□□ 0.8
Cdh4P39038 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh4P39038 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh4P39038 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh4P39038 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh4P39038 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.04■□□□□ 0.8
Cdh4P39038 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh4P39038 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh4P39038 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh4P39038 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh4P39038 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.04■□□□□ 0.8
Cdh4P39038 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh4P39038 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cdh4P39038 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh4P39038 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh4P39038 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.03■□□□□ 0.8
Cdh4P39038 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh4P39038 Gm10399-202ENSMUST00000202768 748 ntBASIC20.03■□□□□ 0.8
Cdh4P39038 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.03■□□□□ 0.8
Cdh4P39038 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh4P39038 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cdh4P39038 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh4P39038 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh4P39038 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh4P39038 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh4P39038 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh4P39038 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh4P39038 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.02■□□□□ 0.8
Cdh4P39038 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh4P39038 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh4P39038 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh4P39038 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Cdh4P39038 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdh4P39038 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms