Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LdlrP35951 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.85■□□□□ 0.93
LdlrP35951 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LdlrP35951 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LdlrP35951 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LdlrP35951 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LdlrP35951 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LdlrP35951 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LdlrP35951 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LdlrP35951 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LdlrP35951 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.84■□□□□ 0.93
LdlrP35951 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LdlrP35951 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.83■□□□□ 0.93
LdlrP35951 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LdlrP35951 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LdlrP35951 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LdlrP35951 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.83■□□□□ 0.93
LdlrP35951 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LdlrP35951 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LdlrP35951 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LdlrP35951 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LdlrP35951 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LdlrP35951 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LdlrP35951 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.82■□□□□ 0.92
LdlrP35951 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
LdlrP35951 Notumos-201ENSMUST00000151998 2659 ntBASIC20.82■□□□□ 0.92
LdlrP35951 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LdlrP35951 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LdlrP35951 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.81■□□□□ 0.92
LdlrP35951 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LdlrP35951 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.81■□□□□ 0.92
LdlrP35951 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LdlrP35951 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LdlrP35951 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LdlrP35951 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LdlrP35951 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LdlrP35951 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LdlrP35951 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LdlrP35951 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LdlrP35951 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LdlrP35951 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LdlrP35951 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LdlrP35951 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LdlrP35951 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LdlrP35951 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LdlrP35951 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LdlrP35951 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
LdlrP35951 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
LdlrP35951 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LdlrP35951 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LdlrP35951 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LdlrP35951 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LdlrP35951 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LdlrP35951 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.79■□□□□ 0.92
LdlrP35951 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LdlrP35951 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LdlrP35951 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LdlrP35951 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LdlrP35951 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LdlrP35951 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.79■□□□□ 0.92
LdlrP35951 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LdlrP35951 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LdlrP35951 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LdlrP35951 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.79■□□□□ 0.92
LdlrP35951 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LdlrP35951 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LdlrP35951 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.78■□□□□ 0.92
LdlrP35951 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LdlrP35951 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
LdlrP35951 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LdlrP35951 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LdlrP35951 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
LdlrP35951 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LdlrP35951 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LdlrP35951 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.76■□□□□ 0.91
LdlrP35951 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.76■□□□□ 0.91
LdlrP35951 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LdlrP35951 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LdlrP35951 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LdlrP35951 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LdlrP35951 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.75■□□□□ 0.91
LdlrP35951 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LdlrP35951 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LdlrP35951 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LdlrP35951 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LdlrP35951 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LdlrP35951 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LdlrP35951 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LdlrP35951 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.75■□□□□ 0.91
LdlrP35951 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LdlrP35951 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LdlrP35951 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LdlrP35951 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LdlrP35951 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LdlrP35951 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LdlrP35951 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LdlrP35951 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LdlrP35951 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LdlrP35951 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LdlrP35951 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms