Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Slc6a13P31649 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc6a13P31649 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc6a13P31649 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Slc6a13P31649 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Slc6a13P31649 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc6a13P31649 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
Slc6a13P31649 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.46■■□□□ 1.03
Slc6a13P31649 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc6a13P31649 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc6a13P31649 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.03
Slc6a13P31649 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a13P31649 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a13P31649 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Slc6a13P31649 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Slc6a13P31649 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Slc6a13P31649 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a13P31649 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc6a13P31649 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc6a13P31649 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Slc6a13P31649 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a13P31649 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.43■■□□□ 1.02
Slc6a13P31649 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc6a13P31649 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc6a13P31649 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.42■■□□□ 1.02
Slc6a13P31649 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Slc6a13P31649 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Slc6a13P31649 Gm5812-201ENSMUST00000061073 957 ntBASIC21.42■■□□□ 1.02
Slc6a13P31649 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Slc6a13P31649 Gm10232-201ENSMUST00000089221 720 ntBASIC21.41■■□□□ 1.02
Slc6a13P31649 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Slc6a13P31649 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc6a13P31649 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.4■■□□□ 1.02
Slc6a13P31649 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc6a13P31649 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc6a13P31649 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.4■■□□□ 1.02
Slc6a13P31649 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc6a13P31649 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc6a13P31649 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Slc6a13P31649 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slc6a13P31649 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc6a13P31649 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc6a13P31649 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc6a13P31649 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a13P31649 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a13P31649 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a13P31649 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a13P31649 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.38■■□□□ 1.01
Slc6a13P31649 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a13P31649 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a13P31649 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a13P31649 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a13P31649 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a13P31649 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a13P31649 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a13P31649 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.37■■□□□ 1.01
Slc6a13P31649 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.37■■□□□ 1.01
Slc6a13P31649 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.37■■□□□ 1.01
Slc6a13P31649 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a13P31649 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a13P31649 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a13P31649 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a13P31649 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Slc6a13P31649 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.36■■□□□ 1.01
Slc6a13P31649 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a13P31649 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a13P31649 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.36■■□□□ 1.01
Slc6a13P31649 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc6a13P31649 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Slc6a13P31649 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.35■■□□□ 1.01
Slc6a13P31649 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc6a13P31649 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc6a13P31649 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc6a13P31649 Gm15820-201ENSMUST00000201566 728 ntBASIC21.35■■□□□ 1.01
Slc6a13P31649 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Slc6a13P31649 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Slc6a13P31649 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.35■■□□□ 1.01
Slc6a13P31649 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a13P31649 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.34■■□□□ 1.01
Slc6a13P31649 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Slc6a13P31649 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a13P31649 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Slc6a13P31649 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a13P31649 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Slc6a13P31649 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a13P31649 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Slc6a13P31649 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a13P31649 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.33■■□□□ 1.01
Slc6a13P31649 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a13P31649 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a13P31649 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a13P31649 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a13P31649 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Slc6a13P31649 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.33■■□□□ 1
Slc6a13P31649 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.33■■□□□ 1
Slc6a13P31649 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a13P31649 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.32■■□□□ 1
Slc6a13P31649 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a13P31649 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a13P31649 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms