Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.11■□□□□ 0.81
Sod1P08228 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.11■□□□□ 0.81
Sod1P08228 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sod1P08228 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
Sod1P08228 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sod1P08228 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.11■□□□□ 0.81
Sod1P08228 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sod1P08228 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sod1P08228 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sod1P08228 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Sod1P08228 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Sod1P08228 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sod1P08228 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sod1P08228 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sod1P08228 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sod1P08228 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sod1P08228 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Sod1P08228 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sod1P08228 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sod1P08228 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Sod1P08228 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sod1P08228 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sod1P08228 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Sod1P08228 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sod1P08228 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Sod1P08228 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sod1P08228 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sod1P08228 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.08■□□□□ 0.81
Sod1P08228 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.08■□□□□ 0.81
Sod1P08228 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sod1P08228 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sod1P08228 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Sod1P08228 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sod1P08228 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.07■□□□□ 0.8
Sod1P08228 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sod1P08228 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sod1P08228 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sod1P08228 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sod1P08228 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sod1P08228 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.06■□□□□ 0.8
Sod1P08228 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sod1P08228 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sod1P08228 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.05■□□□□ 0.8
Sod1P08228 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Sod1P08228 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sod1P08228 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Sod1P08228 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sod1P08228 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Sod1P08228 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
Sod1P08228 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.04■□□□□ 0.8
Sod1P08228 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.04■□□□□ 0.8
Sod1P08228 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sod1P08228 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sod1P08228 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sod1P08228 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sod1P08228 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Sod1P08228 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sod1P08228 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sod1P08228 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.03■□□□□ 0.8
Sod1P08228 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sod1P08228 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.03■□□□□ 0.8
Sod1P08228 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Sod1P08228 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sod1P08228 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sod1P08228 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
Sod1P08228 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sod1P08228 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Sod1P08228 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sod1P08228 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sod1P08228 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sod1P08228 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sod1P08228 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sod1P08228 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sod1P08228 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.02■□□□□ 0.8
Sod1P08228 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sod1P08228 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sod1P08228 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.02■□□□□ 0.79
Sod1P08228 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sod1P08228 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sod1P08228 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sod1P08228 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Sod1P08228 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Sod1P08228 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sod1P08228 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Sod1P08228 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Sod1P08228 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Sod1P08228 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sod1P08228 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sod1P08228 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sod1P08228 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20■□□□□ 0.79
Sod1P08228 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sod1P08228 Gm10657-201ENSMUST00000193528 1031 ntBASIC20■□□□□ 0.79
Sod1P08228 Gm6139-201ENSMUST00000079261 882 ntBASIC20■□□□□ 0.79
Sod1P08228 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sod1P08228 Gm4430-201ENSMUST00000192413 1943 ntBASIC20■□□□□ 0.79
Sod1P08228 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Sod1P08228 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sod1P08228 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sod1P08228 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.99■□□□□ 0.79
Sod1P08228 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 170.9 ms