Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Serp2-204ENSMUST00000228055 705 ntBASIC18.79■□□□□ 0.6
NgfP01139 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NgfP01139 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NgfP01139 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NgfP01139 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NgfP01139 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NgfP01139 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NgfP01139 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NgfP01139 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.78■□□□□ 0.6
NgfP01139 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NgfP01139 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NgfP01139 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NgfP01139 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NgfP01139 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NgfP01139 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NgfP01139 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NgfP01139 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NgfP01139 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NgfP01139 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.77■□□□□ 0.6
NgfP01139 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.77■□□□□ 0.6
NgfP01139 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NgfP01139 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NgfP01139 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NgfP01139 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.77■□□□□ 0.59
NgfP01139 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NgfP01139 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NgfP01139 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NgfP01139 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NgfP01139 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NgfP01139 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.75■□□□□ 0.59
NgfP01139 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NgfP01139 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.75■□□□□ 0.59
NgfP01139 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.75■□□□□ 0.59
NgfP01139 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NgfP01139 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
NgfP01139 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NgfP01139 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NgfP01139 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NgfP01139 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NgfP01139 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.74■□□□□ 0.59
NgfP01139 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.74■□□□□ 0.59
NgfP01139 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NgfP01139 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.74■□□□□ 0.59
NgfP01139 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NgfP01139 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
NgfP01139 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NgfP01139 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NgfP01139 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NgfP01139 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NgfP01139 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NgfP01139 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NgfP01139 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
NgfP01139 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NgfP01139 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
NgfP01139 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.72■□□□□ 0.59
NgfP01139 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
NgfP01139 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NgfP01139 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NgfP01139 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NgfP01139 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.71■□□□□ 0.59
NgfP01139 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NgfP01139 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NgfP01139 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NgfP01139 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NgfP01139 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NgfP01139 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NgfP01139 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
NgfP01139 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NgfP01139 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NgfP01139 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NgfP01139 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NgfP01139 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
NgfP01139 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.7■□□□□ 0.58
NgfP01139 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NgfP01139 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NgfP01139 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NgfP01139 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NgfP01139 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NgfP01139 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NgfP01139 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.69■□□□□ 0.58
NgfP01139 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NgfP01139 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NgfP01139 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NgfP01139 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NgfP01139 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NgfP01139 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.68■□□□□ 0.58
NgfP01139 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NgfP01139 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NgfP01139 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NgfP01139 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NgfP01139 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NgfP01139 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NgfP01139 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NgfP01139 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NgfP01139 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NgfP01139 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
NgfP01139 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NgfP01139 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.67■□□□□ 0.58
NgfP01139 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NgfP01139 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms