Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.96■□□□□ 0.47
Cldn1O88551 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.96■□□□□ 0.47
Cldn1O88551 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.96■□□□□ 0.47
Cldn1O88551 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn1O88551 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn1O88551 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn1O88551 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn1O88551 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cldn1O88551 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.96■□□□□ 0.46
Cldn1O88551 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.95■□□□□ 0.46
Cldn1O88551 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn1O88551 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn1O88551 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn1O88551 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.95■□□□□ 0.46
Cldn1O88551 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn1O88551 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn1O88551 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn1O88551 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn1O88551 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Cldn1O88551 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn1O88551 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn1O88551 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
Cldn1O88551 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn1O88551 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn1O88551 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn1O88551 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.94■□□□□ 0.46
Cldn1O88551 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn1O88551 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cldn1O88551 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn1O88551 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn1O88551 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn1O88551 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn1O88551 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn1O88551 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cldn1O88551 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.92■□□□□ 0.46
Cldn1O88551 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cldn1O88551 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn1O88551 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn1O88551 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cldn1O88551 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn1O88551 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn1O88551 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn1O88551 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn1O88551 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.91■□□□□ 0.46
Cldn1O88551 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn1O88551 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn1O88551 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.91■□□□□ 0.46
Cldn1O88551 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cldn1O88551 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
Cldn1O88551 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn1O88551 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.91■□□□□ 0.46
Cldn1O88551 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn1O88551 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn1O88551 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn1O88551 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn1O88551 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.91■□□□□ 0.46
Cldn1O88551 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn1O88551 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.9■□□□□ 0.46
Cldn1O88551 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn1O88551 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn1O88551 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cldn1O88551 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Cldn1O88551 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn1O88551 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Cldn1O88551 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.89■□□□□ 0.45
Cldn1O88551 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.89■□□□□ 0.45
Cldn1O88551 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn1O88551 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn1O88551 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn1O88551 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn1O88551 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cldn1O88551 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn1O88551 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn1O88551 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cldn1O88551 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.88■□□□□ 0.45
Cldn1O88551 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn1O88551 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Cldn1O88551 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.88■□□□□ 0.45
Cldn1O88551 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn1O88551 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn1O88551 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.88■□□□□ 0.45
Cldn1O88551 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn1O88551 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cldn1O88551 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.87■□□□□ 0.45
Cldn1O88551 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn1O88551 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn1O88551 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn1O88551 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cldn1O88551 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn1O88551 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn1O88551 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cldn1O88551 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn1O88551 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn1O88551 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn1O88551 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn1O88551 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cldn1O88551 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn1O88551 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.86■□□□□ 0.45
Cldn1O88551 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.86■□□□□ 0.45
Cldn1O88551 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms