Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ttc3O88196 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ttc3O88196 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ttc3O88196 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ttc3O88196 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ttc3O88196 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
Ttc3O88196 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ttc3O88196 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ttc3O88196 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Ttc3O88196 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ttc3O88196 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ttc3O88196 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ttc3O88196 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.39■■□□□ 1.18
Ttc3O88196 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.39■■□□□ 1.18
Ttc3O88196 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
Ttc3O88196 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.39■■□□□ 1.17
Ttc3O88196 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.39■■□□□ 1.17
Ttc3O88196 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ttc3O88196 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Ttc3O88196 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.38■■□□□ 1.17
Ttc3O88196 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Ttc3O88196 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ttc3O88196 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Ttc3O88196 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.38■■□□□ 1.17
Ttc3O88196 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ttc3O88196 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ttc3O88196 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ttc3O88196 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ttc3O88196 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Ttc3O88196 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ttc3O88196 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.37■■□□□ 1.17
Ttc3O88196 Golgb1-201ENSMUST00000023534 498 ntBASIC22.37■■□□□ 1.17
Ttc3O88196 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ttc3O88196 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ttc3O88196 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ttc3O88196 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ttc3O88196 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ttc3O88196 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ttc3O88196 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.36■■□□□ 1.17
Ttc3O88196 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ttc3O88196 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ttc3O88196 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Ttc3O88196 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Ttc3O88196 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ttc3O88196 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ttc3O88196 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.35■■□□□ 1.17
Ttc3O88196 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Ttc3O88196 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Ttc3O88196 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ttc3O88196 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ttc3O88196 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ttc3O88196 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.34■■□□□ 1.17
Ttc3O88196 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ttc3O88196 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Ttc3O88196 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ttc3O88196 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ttc3O88196 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ttc3O88196 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.34■■□□□ 1.17
Ttc3O88196 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ttc3O88196 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ttc3O88196 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ttc3O88196 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ttc3O88196 Gm27454-201ENSMUST00000185090 204 ntBASIC22.33■■□□□ 1.17
Ttc3O88196 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ttc3O88196 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ttc3O88196 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ttc3O88196 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ttc3O88196 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ttc3O88196 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ttc3O88196 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ttc3O88196 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ttc3O88196 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Ttc3O88196 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.32■■□□□ 1.16
Ttc3O88196 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ttc3O88196 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ttc3O88196 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.31■■□□□ 1.16
Ttc3O88196 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ttc3O88196 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ttc3O88196 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ttc3O88196 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ttc3O88196 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.3■■□□□ 1.16
Ttc3O88196 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Ttc3O88196 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Ttc3O88196 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ttc3O88196 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ttc3O88196 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ttc3O88196 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ttc3O88196 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ttc3O88196 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.29■■□□□ 1.16
Ttc3O88196 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ttc3O88196 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ttc3O88196 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.29■■□□□ 1.16
Ttc3O88196 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ttc3O88196 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ttc3O88196 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ttc3O88196 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ttc3O88196 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ttc3O88196 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.29■■□□□ 1.16
Ttc3O88196 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ttc3O88196 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms