Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC13.74□□□□□ -0.21
Pkd1O08852 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd1O08852 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd1O08852 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pkd1O08852 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd1O08852 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Pkd1O08852 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.74□□□□□ -0.21
Pkd1O08852 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd1O08852 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1O08852 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1O08852 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC13.73□□□□□ -0.21
Pkd1O08852 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1O08852 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1O08852 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1O08852 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1O08852 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1O08852 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1O08852 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1O08852 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1O08852 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC13.72□□□□□ -0.21
Pkd1O08852 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1O08852 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1O08852 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1O08852 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.72□□□□□ -0.21
Pkd1O08852 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pkd1O08852 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pkd1O08852 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pkd1O08852 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1O08852 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1O08852 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pkd1O08852 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1O08852 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.71□□□□□ -0.21
Pkd1O08852 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pkd1O08852 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1O08852 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pkd1O08852 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pkd1O08852 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pkd1O08852 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pkd1O08852 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pkd1O08852 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pkd1O08852 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pkd1O08852 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pkd1O08852 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pkd1O08852 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pkd1O08852 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pkd1O08852 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.7□□□□□ -0.22
Pkd1O08852 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.7□□□□□ -0.22
Pkd1O08852 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.7□□□□□ -0.22
Pkd1O08852 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pkd1O08852 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pkd1O08852 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pkd1O08852 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pkd1O08852 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pkd1O08852 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.69□□□□□ -0.22
Pkd1O08852 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Pkd1O08852 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pkd1O08852 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pkd1O08852 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pkd1O08852 Gm8493-201ENSMUST00000196881 489 ntBASIC13.69□□□□□ -0.22
Pkd1O08852 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pkd1O08852 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pkd1O08852 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pkd1O08852 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC13.68□□□□□ -0.22
Pkd1O08852 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Pkd1O08852 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pkd1O08852 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Pkd1O08852 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pkd1O08852 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.68□□□□□ -0.22
Pkd1O08852 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pkd1O08852 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pkd1O08852 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC13.67□□□□□ -0.22
Pkd1O08852 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pkd1O08852 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.67□□□□□ -0.22
Pkd1O08852 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pkd1O08852 Gm42569-201ENSMUST00000200539 472 ntBASIC13.67□□□□□ -0.22
Pkd1O08852 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pkd1O08852 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pkd1O08852 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC13.66□□□□□ -0.22
Pkd1O08852 Gm10033-202ENSMUST00000211874 928 ntBASIC13.66□□□□□ -0.22
Pkd1O08852 Gm10493-201ENSMUST00000097270 612 ntBASIC13.66□□□□□ -0.22
Pkd1O08852 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pkd1O08852 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Pkd1O08852 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pkd1O08852 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pkd1O08852 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.66□□□□□ -0.22
Pkd1O08852 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pkd1O08852 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pkd1O08852 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.65□□□□□ -0.22
Pkd1O08852 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pkd1O08852 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pkd1O08852 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pkd1O08852 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pkd1O08852 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.65□□□□□ -0.22
Pkd1O08852 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pkd1O08852 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pkd1O08852 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC13.65□□□□□ -0.22
Pkd1O08852 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pkd1O08852 AC158990.1-201ENSMUST00000221450 2016 ntBASIC13.65□□□□□ -0.22
Pkd1O08852 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pkd1O08852 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms