Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC10.56□□□□□ -0.72
Rnf213E9Q555 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf213E9Q555 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf213E9Q555 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC10.54□□□□□ -0.72
Rnf213E9Q555 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf213E9Q555 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf213E9Q555 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf213E9Q555 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf213E9Q555 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf213E9Q555 Nespas-201ENSMUST00000143738 1083 ntBASIC10.53□□□□□ -0.72
Rnf213E9Q555 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf213E9Q555 Gm12933-201ENSMUST00000120203 872 ntBASIC10.53□□□□□ -0.72
Rnf213E9Q555 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC10.53□□□□□ -0.72
Rnf213E9Q555 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC10.53□□□□□ -0.72
Rnf213E9Q555 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf213E9Q555 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf213E9Q555 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf213E9Q555 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Rnf213E9Q555 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC10.52□□□□□ -0.72
Rnf213E9Q555 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Rnf213E9Q555 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Rnf213E9Q555 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC10.52□□□□□ -0.72
Rnf213E9Q555 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC10.52□□□□□ -0.72
Rnf213E9Q555 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Rnf213E9Q555 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC10.52□□□□□ -0.73
Rnf213E9Q555 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.52□□□□□ -0.73
Rnf213E9Q555 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Rnf213E9Q555 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC10.52□□□□□ -0.73
Rnf213E9Q555 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Rnf213E9Q555 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf213E9Q555 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC10.52□□□□□ -0.73
Rnf213E9Q555 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rnf213E9Q555 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC10.51□□□□□ -0.73
Rnf213E9Q555 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf213E9Q555 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf213E9Q555 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf213E9Q555 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC10.51□□□□□ -0.73
Rnf213E9Q555 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf213E9Q555 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf213E9Q555 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf213E9Q555 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rnf213E9Q555 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Gm10602-201ENSMUST00000098239 609 ntBASIC10.5□□□□□ -0.73
Rnf213E9Q555 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC10.5□□□□□ -0.73
Rnf213E9Q555 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC10.5□□□□□ -0.73
Rnf213E9Q555 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Gm18671-201ENSMUST00000214826 683 ntBASIC10.5□□□□□ -0.73
Rnf213E9Q555 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC10.5□□□□□ -0.73
Rnf213E9Q555 AC153504.1-201ENSMUST00000218379 2290 ntBASIC10.5□□□□□ -0.73
Rnf213E9Q555 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rnf213E9Q555 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf213E9Q555 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC10.49□□□□□ -0.73
Rnf213E9Q555 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf213E9Q555 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf213E9Q555 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf213E9Q555 Gm6085-201ENSMUST00000182774 1470 ntBASIC10.49□□□□□ -0.73
Rnf213E9Q555 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms