Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Chd7A2AJK6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
Chd7A2AJK6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd7A2AJK6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.29■■□□□ 1
Chd7A2AJK6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chd7A2AJK6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chd7A2AJK6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chd7A2AJK6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.27■■□□□ 1
Chd7A2AJK6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chd7A2AJK6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chd7A2AJK6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.27■■□□□ 1
Chd7A2AJK6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Chd7A2AJK6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
Chd7A2AJK6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Chd7A2AJK6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.27■□□□□ 0.99
Chd7A2AJK6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chd7A2AJK6 Gm10493-201ENSMUST00000097270 612 ntBASIC21.27■□□□□ 0.99
Chd7A2AJK6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.26■□□□□ 0.99
Chd7A2AJK6 Gm37179-201ENSMUST00000194862 823 ntBASIC21.26■□□□□ 0.99
Chd7A2AJK6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.25■□□□□ 0.99
Chd7A2AJK6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd7A2AJK6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd7A2AJK6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd7A2AJK6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chd7A2AJK6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Chd7A2AJK6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.24■□□□□ 0.99
Chd7A2AJK6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.24■□□□□ 0.99
Chd7A2AJK6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd7A2AJK6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd7A2AJK6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.24■□□□□ 0.99
Chd7A2AJK6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd7A2AJK6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Chd7A2AJK6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Chd7A2AJK6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd7A2AJK6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd7A2AJK6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chd7A2AJK6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.23■□□□□ 0.99
Chd7A2AJK6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chd7A2AJK6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.22■□□□□ 0.99
Chd7A2AJK6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd7A2AJK6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd7A2AJK6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd7A2AJK6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd7A2AJK6 Gm8493-201ENSMUST00000196881 489 ntBASIC21.22■□□□□ 0.99
Chd7A2AJK6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd7A2AJK6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd7A2AJK6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd7A2AJK6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd7A2AJK6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd7A2AJK6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd7A2AJK6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd7A2AJK6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Chd7A2AJK6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.21■□□□□ 0.99
Chd7A2AJK6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.21■□□□□ 0.99
Chd7A2AJK6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd7A2AJK6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.21■□□□□ 0.99
Chd7A2AJK6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd7A2AJK6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.21■□□□□ 0.99
Chd7A2AJK6 Gm12251-201ENSMUST00000117893 792 ntBASIC21.2■□□□□ 0.98
Chd7A2AJK6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd7A2AJK6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd7A2AJK6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Chd7A2AJK6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd7A2AJK6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.2■□□□□ 0.98
Chd7A2AJK6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.2■□□□□ 0.98
Chd7A2AJK6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Chd7A2AJK6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chd7A2AJK6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Chd7A2AJK6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd7A2AJK6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.19■□□□□ 0.98
Chd7A2AJK6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd7A2AJK6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Chd7A2AJK6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chd7A2AJK6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chd7A2AJK6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Chd7A2AJK6 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.18■□□□□ 0.98
Chd7A2AJK6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd7A2AJK6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.18■□□□□ 0.98
Chd7A2AJK6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd7A2AJK6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chd7A2AJK6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.18■□□□□ 0.98
Chd7A2AJK6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd7A2AJK6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd7A2AJK6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chd7A2AJK6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
Chd7A2AJK6 Gm42569-201ENSMUST00000200539 472 ntBASIC21.17■□□□□ 0.98
Chd7A2AJK6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.16■□□□□ 0.98
Chd7A2AJK6 Gm42642-201ENSMUST00000200683 355 ntBASIC21.16■□□□□ 0.98
Chd7A2AJK6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chd7A2AJK6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chd7A2AJK6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd7A2AJK6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Chd7A2AJK6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Chd7A2AJK6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Chd7A2AJK6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd7A2AJK6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Chd7A2AJK6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd7A2AJK6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd7A2AJK6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd7A2AJK6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms