Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col9a3A2ACT7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Col9a3A2ACT7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col9a3A2ACT7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.78■□□□□ 0.92
Col9a3A2ACT7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Col9a3A2ACT7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col9a3A2ACT7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col9a3A2ACT7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col9a3A2ACT7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col9a3A2ACT7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col9a3A2ACT7 Gm6139-201ENSMUST00000079261 882 ntBASIC20.77■□□□□ 0.92
Col9a3A2ACT7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col9a3A2ACT7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col9a3A2ACT7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col9a3A2ACT7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col9a3A2ACT7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col9a3A2ACT7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col9a3A2ACT7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Col9a3A2ACT7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.76■□□□□ 0.91
Col9a3A2ACT7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col9a3A2ACT7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.76■□□□□ 0.91
Col9a3A2ACT7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col9a3A2ACT7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col9a3A2ACT7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col9a3A2ACT7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col9a3A2ACT7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col9a3A2ACT7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.75■□□□□ 0.91
Col9a3A2ACT7 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.75■□□□□ 0.91
Col9a3A2ACT7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col9a3A2ACT7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col9a3A2ACT7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.75■□□□□ 0.91
Col9a3A2ACT7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Col9a3A2ACT7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col9a3A2ACT7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Col9a3A2ACT7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Col9a3A2ACT7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col9a3A2ACT7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col9a3A2ACT7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col9a3A2ACT7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.74■□□□□ 0.91
Col9a3A2ACT7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col9a3A2ACT7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Col9a3A2ACT7 Gm43137-201ENSMUST00000198052 594 ntBASIC20.73■□□□□ 0.91
Col9a3A2ACT7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.73■□□□□ 0.91
Col9a3A2ACT7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a3A2ACT7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.72■□□□□ 0.91
Col9a3A2ACT7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a3A2ACT7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.72■□□□□ 0.91
Col9a3A2ACT7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.72■□□□□ 0.91
Col9a3A2ACT7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Col9a3A2ACT7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.72■□□□□ 0.91
Col9a3A2ACT7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a3A2ACT7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.72■□□□□ 0.91
Col9a3A2ACT7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a3A2ACT7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a3A2ACT7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col9a3A2ACT7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Col9a3A2ACT7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col9a3A2ACT7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Col9a3A2ACT7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.71■□□□□ 0.91
Col9a3A2ACT7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Col9a3A2ACT7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col9a3A2ACT7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Col9a3A2ACT7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col9a3A2ACT7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col9a3A2ACT7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Col9a3A2ACT7 Gm8495-201ENSMUST00000188740 694 ntBASIC20.7■□□□□ 0.9
Col9a3A2ACT7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Col9a3A2ACT7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col9a3A2ACT7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Col9a3A2ACT7 Gm18284-201ENSMUST00000172604 624 ntBASIC20.69■□□□□ 0.9
Col9a3A2ACT7 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.69■□□□□ 0.9
Col9a3A2ACT7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a3A2ACT7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a3A2ACT7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col9a3A2ACT7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.69■□□□□ 0.9
Col9a3A2ACT7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Col9a3A2ACT7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col9a3A2ACT7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col9a3A2ACT7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col9a3A2ACT7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col9a3A2ACT7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Col9a3A2ACT7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Col9a3A2ACT7 Mir7075-201ENSMUST00000184187 82 ntBASIC20.67■□□□□ 0.9
Col9a3A2ACT7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.67■□□□□ 0.9
Col9a3A2ACT7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.67■□□□□ 0.9
Col9a3A2ACT7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col9a3A2ACT7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col9a3A2ACT7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Col9a3A2ACT7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a3A2ACT7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a3A2ACT7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a3A2ACT7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a3A2ACT7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.66■□□□□ 0.9
Col9a3A2ACT7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a3A2ACT7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a3A2ACT7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Col9a3A2ACT7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.66■□□□□ 0.9
Col9a3A2ACT7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col9a3A2ACT7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col9a3A2ACT7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 177.1 ms