Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv17A0A140T8P8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv17A0A140T8P8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv17A0A140T8P8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trbv17A0A140T8P8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv17A0A140T8P8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv17A0A140T8P8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv17A0A140T8P8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Trbv17A0A140T8P8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.03■□□□□ 0.16
Trbv17A0A140T8P8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.03■□□□□ 0.16
Trbv17A0A140T8P8 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.03■□□□□ 0.16
Trbv17A0A140T8P8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.03■□□□□ 0.16
Trbv17A0A140T8P8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv17A0A140T8P8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv17A0A140T8P8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv17A0A140T8P8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trbv17A0A140T8P8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trbv17A0A140T8P8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv17A0A140T8P8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv17A0A140T8P8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv17A0A140T8P8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv17A0A140T8P8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv17A0A140T8P8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv17A0A140T8P8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv17A0A140T8P8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv17A0A140T8P8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv17A0A140T8P8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv17A0A140T8P8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv17A0A140T8P8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trbv17A0A140T8P8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.01■□□□□ 0.15
Trbv17A0A140T8P8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.01■□□□□ 0.15
Trbv17A0A140T8P8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trbv17A0A140T8P8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Trbv17A0A140T8P8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv17A0A140T8P8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv17A0A140T8P8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv17A0A140T8P8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv17A0A140T8P8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.99■□□□□ 0.15
Trbv17A0A140T8P8 Gm5921-201ENSMUST00000075898 882 ntBASIC15.99■□□□□ 0.15
Trbv17A0A140T8P8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv17A0A140T8P8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv17A0A140T8P8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv17A0A140T8P8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.98■□□□□ 0.15
Trbv17A0A140T8P8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv17A0A140T8P8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv17A0A140T8P8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv17A0A140T8P8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.98■□□□□ 0.15
Trbv17A0A140T8P8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv17A0A140T8P8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv17A0A140T8P8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv17A0A140T8P8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv17A0A140T8P8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv17A0A140T8P8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.97■□□□□ 0.15
Trbv17A0A140T8P8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv17A0A140T8P8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.97■□□□□ 0.15
Trbv17A0A140T8P8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv17A0A140T8P8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv17A0A140T8P8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv17A0A140T8P8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.97■□□□□ 0.15
Trbv17A0A140T8P8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv17A0A140T8P8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv17A0A140T8P8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv17A0A140T8P8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv17A0A140T8P8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trbv17A0A140T8P8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.96■□□□□ 0.15
Trbv17A0A140T8P8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv17A0A140T8P8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trbv17A0A140T8P8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv17A0A140T8P8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms