Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
1700028J19RikA0A0U1RP08 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.8■□□□□ 0.76
1700028J19RikA0A0U1RP08 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.8■□□□□ 0.76
1700028J19RikA0A0U1RP08 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.78■□□□□ 0.76
1700028J19RikA0A0U1RP08 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
1700028J19RikA0A0U1RP08 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
1700028J19RikA0A0U1RP08 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
1700028J19RikA0A0U1RP08 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
1700028J19RikA0A0U1RP08 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
1700028J19RikA0A0U1RP08 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
1700028J19RikA0A0U1RP08 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
1700028J19RikA0A0U1RP08 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
1700028J19RikA0A0U1RP08 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.77■□□□□ 0.76
1700028J19RikA0A0U1RP08 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
1700028J19RikA0A0U1RP08 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
1700028J19RikA0A0U1RP08 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Cap2-205ENSMUST00000225824 1634 ntBASIC19.73■□□□□ 0.75
1700028J19RikA0A0U1RP08 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
1700028J19RikA0A0U1RP08 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
1700028J19RikA0A0U1RP08 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
1700028J19RikA0A0U1RP08 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
1700028J19RikA0A0U1RP08 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
1700028J19RikA0A0U1RP08 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms