Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
1700028J19RikA0A0U1RP08 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.8■□□□□ 0.76
1700028J19RikA0A0U1RP08 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.8■□□□□ 0.76
1700028J19RikA0A0U1RP08 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
1700028J19RikA0A0U1RP08 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.78■□□□□ 0.76
1700028J19RikA0A0U1RP08 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
1700028J19RikA0A0U1RP08 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
1700028J19RikA0A0U1RP08 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
1700028J19RikA0A0U1RP08 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
1700028J19RikA0A0U1RP08 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
1700028J19RikA0A0U1RP08 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
1700028J19RikA0A0U1RP08 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
1700028J19RikA0A0U1RP08 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
1700028J19RikA0A0U1RP08 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.77■□□□□ 0.76
1700028J19RikA0A0U1RP08 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
1700028J19RikA0A0U1RP08 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
1700028J19RikA0A0U1RP08 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
1700028J19RikA0A0U1RP08 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
1700028J19RikA0A0U1RP08 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
1700028J19RikA0A0U1RP08 Cap2-205ENSMUST00000225824 1634 ntBASIC19.73■□□□□ 0.75
1700028J19RikA0A0U1RP08 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
1700028J19RikA0A0U1RP08 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
1700028J19RikA0A0U1RP08 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
1700028J19RikA0A0U1RP08 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
1700028J19RikA0A0U1RP08 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
1700028J19RikA0A0U1RP08 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
1700028J19RikA0A0U1RP08 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
1700028J19RikA0A0U1RP08 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
1700028J19RikA0A0U1RP08 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
1700028J19RikA0A0U1RP08 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms